Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
Ccdc28aQ8CEI3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc28aQ8CEI3 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Ccdc28aQ8CEI3 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc28aQ8CEI3 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc28aQ8CEI3 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Ccdc28aQ8CEI3 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc28aQ8CEI3 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc28aQ8CEI3 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc28aQ8CEI3 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc28aQ8CEI3 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.24■□□□□ 0.19
Ccdc28aQ8CEI3 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.24■□□□□ 0.19
Ccdc28aQ8CEI3 Gm5587-201ENSMUST00000206270 674 ntBASIC16.24■□□□□ 0.19
Ccdc28aQ8CEI3 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc28aQ8CEI3 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.24■□□□□ 0.19
Ccdc28aQ8CEI3 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc28aQ8CEI3 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Ccdc28aQ8CEI3 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc28aQ8CEI3 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.24■□□□□ 0.19
Ccdc28aQ8CEI3 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc28aQ8CEI3 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc28aQ8CEI3 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Ccdc28aQ8CEI3 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc28aQ8CEI3 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Ccdc28aQ8CEI3 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc28aQ8CEI3 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc28aQ8CEI3 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc28aQ8CEI3 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Ccdc28aQ8CEI3 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc28aQ8CEI3 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc28aQ8CEI3 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Ccdc28aQ8CEI3 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ccdc28aQ8CEI3 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Ccdc28aQ8CEI3 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc28aQ8CEI3 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc28aQ8CEI3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc28aQ8CEI3 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Ccdc28aQ8CEI3 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc28aQ8CEI3 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Ccdc28aQ8CEI3 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc28aQ8CEI3 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.23■□□□□ 0.19
Ccdc28aQ8CEI3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Ccdc28aQ8CEI3 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc28aQ8CEI3 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc28aQ8CEI3 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Ccdc28aQ8CEI3 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc28aQ8CEI3 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc28aQ8CEI3 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ccdc28aQ8CEI3 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc28aQ8CEI3 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc28aQ8CEI3 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc28aQ8CEI3 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc28aQ8CEI3 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccdc28aQ8CEI3 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 Gm14722-201ENSMUST00000118943 689 ntBASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 Gm8825-201ENSMUST00000182565 998 ntBASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 Gm4518-201ENSMUST00000182638 718 ntBASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccdc28aQ8CEI3 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc28aQ8CEI3 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc28aQ8CEI3 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc28aQ8CEI3 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc28aQ8CEI3 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.21■□□□□ 0.19
Ccdc28aQ8CEI3 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccdc28aQ8CEI3 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.21■□□□□ 0.19
Ccdc28aQ8CEI3 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms