Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rsph6aQ8CDR2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rsph6aQ8CDR2 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rsph6aQ8CDR2 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC19.98■□□□□ 0.79
Rsph6aQ8CDR2 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rsph6aQ8CDR2 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rsph6aQ8CDR2 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rsph6aQ8CDR2 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rsph6aQ8CDR2 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rsph6aQ8CDR2 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Rsph6aQ8CDR2 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rsph6aQ8CDR2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rsph6aQ8CDR2 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rsph6aQ8CDR2 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rsph6aQ8CDR2 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rsph6aQ8CDR2 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC19.97■□□□□ 0.79
Rsph6aQ8CDR2 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rsph6aQ8CDR2 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC19.97■□□□□ 0.79
Rsph6aQ8CDR2 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rsph6aQ8CDR2 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
Rsph6aQ8CDR2 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Rsph6aQ8CDR2 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rsph6aQ8CDR2 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC19.96■□□□□ 0.79
Rsph6aQ8CDR2 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rsph6aQ8CDR2 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rsph6aQ8CDR2 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rsph6aQ8CDR2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rsph6aQ8CDR2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rsph6aQ8CDR2 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC19.96■□□□□ 0.79
Rsph6aQ8CDR2 Mir6990-201ENSMUST00000183724 91 ntBASIC19.96■□□□□ 0.79
Rsph6aQ8CDR2 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC19.96■□□□□ 0.79
Rsph6aQ8CDR2 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Rsph6aQ8CDR2 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.96■□□□□ 0.79
Rsph6aQ8CDR2 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rsph6aQ8CDR2 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rsph6aQ8CDR2 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rsph6aQ8CDR2 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Rsph6aQ8CDR2 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC19.96■□□□□ 0.79
Rsph6aQ8CDR2 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rsph6aQ8CDR2 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rsph6aQ8CDR2 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rsph6aQ8CDR2 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC19.95■□□□□ 0.78
Rsph6aQ8CDR2 AC163637.1-201ENSMUST00000215491 1894 ntBASIC19.95■□□□□ 0.78
Rsph6aQ8CDR2 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rsph6aQ8CDR2 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rsph6aQ8CDR2 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Rsph6aQ8CDR2 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Rsph6aQ8CDR2 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rsph6aQ8CDR2 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rsph6aQ8CDR2 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC19.95■□□□□ 0.78
Rsph6aQ8CDR2 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rsph6aQ8CDR2 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Rsph6aQ8CDR2 CT030684.1-201ENSMUST00000227292 914 ntBASIC19.95■□□□□ 0.78
Rsph6aQ8CDR2 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rsph6aQ8CDR2 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rsph6aQ8CDR2 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rsph6aQ8CDR2 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rsph6aQ8CDR2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rsph6aQ8CDR2 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rsph6aQ8CDR2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rsph6aQ8CDR2 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rsph6aQ8CDR2 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rsph6aQ8CDR2 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rsph6aQ8CDR2 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rsph6aQ8CDR2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rsph6aQ8CDR2 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rsph6aQ8CDR2 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.94■□□□□ 0.78
Rsph6aQ8CDR2 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rsph6aQ8CDR2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rsph6aQ8CDR2 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rsph6aQ8CDR2 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Rsph6aQ8CDR2 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC19.94■□□□□ 0.78
Rsph6aQ8CDR2 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rsph6aQ8CDR2 Rprl2-201ENSMUST00000157150 290 ntBASIC19.94■□□□□ 0.78
Rsph6aQ8CDR2 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Rsph6aQ8CDR2 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Rsph6aQ8CDR2 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC19.94■□□□□ 0.78
Rsph6aQ8CDR2 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC19.94■□□□□ 0.78
Rsph6aQ8CDR2 Gm43474-201ENSMUST00000196415 774 ntBASIC19.94■□□□□ 0.78
Rsph6aQ8CDR2 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC19.94■□□□□ 0.78
Rsph6aQ8CDR2 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC19.94■□□□□ 0.78
Rsph6aQ8CDR2 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC19.94■□□□□ 0.78
Rsph6aQ8CDR2 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rsph6aQ8CDR2 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rsph6aQ8CDR2 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Rsph6aQ8CDR2 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rsph6aQ8CDR2 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rsph6aQ8CDR2 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.94■□□□□ 0.78
Rsph6aQ8CDR2 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rsph6aQ8CDR2 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Rsph6aQ8CDR2 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rsph6aQ8CDR2 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rsph6aQ8CDR2 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Rsph6aQ8CDR2 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Rsph6aQ8CDR2 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Rsph6aQ8CDR2 AC126250.1-201ENSMUST00000228343 1768 ntBASIC19.93■□□□□ 0.78
Rsph6aQ8CDR2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rsph6aQ8CDR2 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rsph6aQ8CDR2 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rsph6aQ8CDR2 Nudt18-203ENSMUST00000228768 1578 ntBASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms