Protein–RNA interactions for Protein: Q8CD60

UPF0583 protein C15orf59 homolog, mousemouse

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CD60 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Q8CD60 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Q8CD60 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Q8CD60 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Q8CD60 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Q8CD60 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Q8CD60 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Q8CD60 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Q8CD60 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Q8CD60 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Q8CD60 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.17■□□□□ 0.18
Q8CD60 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Q8CD60 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Q8CD60 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Q8CD60 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Q8CD60 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.17■□□□□ 0.18
Q8CD60 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.17■□□□□ 0.18
Q8CD60 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.17■□□□□ 0.18
Q8CD60 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Q8CD60 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Q8CD60 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Q8CD60 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Q8CD60 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Q8CD60 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Q8CD60 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Q8CD60 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Q8CD60 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Q8CD60 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Q8CD60 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Q8CD60 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Q8CD60 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Q8CD60 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.16■□□□□ 0.18
Q8CD60 Gm37153-201ENSMUST00000193637 231 ntBASIC16.16■□□□□ 0.18
Q8CD60 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.16■□□□□ 0.18
Q8CD60 Gm18195-201ENSMUST00000207604 706 ntBASIC16.16■□□□□ 0.18
Q8CD60 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
Q8CD60 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Q8CD60 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Q8CD60 Asic1-205ENSMUST00000228185 1818 ntBASIC16.16■□□□□ 0.18
Q8CD60 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.16■□□□□ 0.18
Q8CD60 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Q8CD60 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Q8CD60 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.16■□□□□ 0.18
Q8CD60 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Q8CD60 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Q8CD60 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Q8CD60 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.16■□□□□ 0.18
Q8CD60 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Q8CD60 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Q8CD60 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Q8CD60 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Q8CD60 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Q8CD60 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Q8CD60 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Q8CD60 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Q8CD60 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Q8CD60 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Q8CD60 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Q8CD60 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Q8CD60 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.15■□□□□ 0.18
Q8CD60 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.15■□□□□ 0.18
Q8CD60 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.15■□□□□ 0.18
Q8CD60 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Q8CD60 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Q8CD60 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.15■□□□□ 0.18
Q8CD60 Gm8318-201ENSMUST00000182954 872 ntBASIC16.15■□□□□ 0.18
Q8CD60 Gm2651-201ENSMUST00000203560 838 ntBASIC16.15■□□□□ 0.18
Q8CD60 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.15■□□□□ 0.18
Q8CD60 AV026068-213ENSMUST00000223675 1171 ntBASIC16.15■□□□□ 0.18
Q8CD60 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.15■□□□□ 0.18
Q8CD60 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Q8CD60 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Q8CD60 Gm15590-201ENSMUST00000078419 552 ntBASIC16.15■□□□□ 0.18
Q8CD60 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Q8CD60 BC037039-201ENSMUST00000192003 2205 ntBASIC16.15■□□□□ 0.18
Q8CD60 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Q8CD60 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Q8CD60 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Q8CD60 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Q8CD60 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Q8CD60 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Q8CD60 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Q8CD60 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.14■□□□□ 0.18
Q8CD60 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Q8CD60 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Q8CD60 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Q8CD60 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Q8CD60 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Q8CD60 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Q8CD60 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Q8CD60 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Q8CD60 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Q8CD60 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Q8CD60 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.14■□□□□ 0.17
Q8CD60 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.14■□□□□ 0.17
Q8CD60 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Q8CD60 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Q8CD60 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.14■□□□□ 0.17
Q8CD60 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.14■□□□□ 0.17
Q8CD60 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms