Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Aph1bQ8C7N7 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.23■□□□□ 0.03
Aph1bQ8C7N7 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Aph1bQ8C7N7 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Aph1bQ8C7N7 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Aph1bQ8C7N7 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Aph1bQ8C7N7 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Aph1bQ8C7N7 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Aph1bQ8C7N7 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Aph1bQ8C7N7 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Aph1bQ8C7N7 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Aph1bQ8C7N7 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Aph1bQ8C7N7 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Aph1bQ8C7N7 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Aph1bQ8C7N7 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Aph1bQ8C7N7 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Aph1bQ8C7N7 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Aph1bQ8C7N7 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Aph1bQ8C7N7 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Aph1bQ8C7N7 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.22■□□□□ 0.03
Aph1bQ8C7N7 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.22■□□□□ 0.03
Aph1bQ8C7N7 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Aph1bQ8C7N7 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Aph1bQ8C7N7 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.22■□□□□ 0.03
Aph1bQ8C7N7 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Aph1bQ8C7N7 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Aph1bQ8C7N7 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.22■□□□□ 0.03
Aph1bQ8C7N7 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.22■□□□□ 0.03
Aph1bQ8C7N7 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Aph1bQ8C7N7 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Aph1bQ8C7N7 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Aph1bQ8C7N7 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.21■□□□□ 0.03
Aph1bQ8C7N7 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Aph1bQ8C7N7 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Aph1bQ8C7N7 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Aph1bQ8C7N7 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Aph1bQ8C7N7 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Aph1bQ8C7N7 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Aph1bQ8C7N7 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.21■□□□□ 0.03
Aph1bQ8C7N7 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Aph1bQ8C7N7 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Aph1bQ8C7N7 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.21■□□□□ 0.03
Aph1bQ8C7N7 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Aph1bQ8C7N7 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Aph1bQ8C7N7 Gm33142-201ENSMUST00000193913 867 ntBASIC15.21■□□□□ 0.03
Aph1bQ8C7N7 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Aph1bQ8C7N7 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Aph1bQ8C7N7 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Aph1bQ8C7N7 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Aph1bQ8C7N7 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
Aph1bQ8C7N7 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Aph1bQ8C7N7 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Aph1bQ8C7N7 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.02
Aph1bQ8C7N7 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.21■□□□□ 0.02
Aph1bQ8C7N7 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Aph1bQ8C7N7 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.2■□□□□ 0.02
Aph1bQ8C7N7 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Aph1bQ8C7N7 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Aph1bQ8C7N7 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.2■□□□□ 0.02
Aph1bQ8C7N7 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Aph1bQ8C7N7 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Aph1bQ8C7N7 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Aph1bQ8C7N7 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Aph1bQ8C7N7 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Aph1bQ8C7N7 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.2■□□□□ 0.02
Aph1bQ8C7N7 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Aph1bQ8C7N7 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.2■□□□□ 0.02
Aph1bQ8C7N7 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Aph1bQ8C7N7 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Aph1bQ8C7N7 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.2■□□□□ 0.02
Aph1bQ8C7N7 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Aph1bQ8C7N7 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Aph1bQ8C7N7 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Aph1bQ8C7N7 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Aph1bQ8C7N7 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Aph1bQ8C7N7 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Aph1bQ8C7N7 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Aph1bQ8C7N7 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.2■□□□□ 0.02
Aph1bQ8C7N7 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Aph1bQ8C7N7 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Aph1bQ8C7N7 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Aph1bQ8C7N7 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Aph1bQ8C7N7 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Aph1bQ8C7N7 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Aph1bQ8C7N7 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Aph1bQ8C7N7 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Aph1bQ8C7N7 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.19■□□□□ 0.02
Aph1bQ8C7N7 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Aph1bQ8C7N7 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Aph1bQ8C7N7 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Aph1bQ8C7N7 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Aph1bQ8C7N7 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Aph1bQ8C7N7 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Aph1bQ8C7N7 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Aph1bQ8C7N7 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.19■□□□□ 0.02
Aph1bQ8C7N7 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.19■□□□□ 0.02
Aph1bQ8C7N7 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Aph1bQ8C7N7 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Aph1bQ8C7N7 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Aph1bQ8C7N7 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms