Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.91□□□□□ -0.34
Tsen54Q8C2A2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tsen54Q8C2A2 Gm7213-201ENSMUST00000215977 950 ntBASIC12.91□□□□□ -0.34
Tsen54Q8C2A2 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tsen54Q8C2A2 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tsen54Q8C2A2 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tsen54Q8C2A2 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tsen54Q8C2A2 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tsen54Q8C2A2 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Tsen54Q8C2A2 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tsen54Q8C2A2 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
Tsen54Q8C2A2 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tsen54Q8C2A2 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tsen54Q8C2A2 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tsen54Q8C2A2 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tsen54Q8C2A2 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tsen54Q8C2A2 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.91□□□□□ -0.34
Tsen54Q8C2A2 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tsen54Q8C2A2 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tsen54Q8C2A2 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tsen54Q8C2A2 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tsen54Q8C2A2 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Tsen54Q8C2A2 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tsen54Q8C2A2 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tsen54Q8C2A2 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tsen54Q8C2A2 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Tsen54Q8C2A2 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tsen54Q8C2A2 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tsen54Q8C2A2 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.9□□□□□ -0.34
Tsen54Q8C2A2 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tsen54Q8C2A2 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tsen54Q8C2A2 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tsen54Q8C2A2 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tsen54Q8C2A2 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tsen54Q8C2A2 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tsen54Q8C2A2 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tsen54Q8C2A2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.9□□□□□ -0.34
Tsen54Q8C2A2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tsen54Q8C2A2 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tsen54Q8C2A2 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tsen54Q8C2A2 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.9□□□□□ -0.34
Tsen54Q8C2A2 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.9□□□□□ -0.34
Tsen54Q8C2A2 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tsen54Q8C2A2 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tsen54Q8C2A2 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Tsen54Q8C2A2 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.9□□□□□ -0.34
Tsen54Q8C2A2 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tsen54Q8C2A2 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tsen54Q8C2A2 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tsen54Q8C2A2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.9□□□□□ -0.35
Tsen54Q8C2A2 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.9□□□□□ -0.35
Tsen54Q8C2A2 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Tsen54Q8C2A2 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Gm27389-201ENSMUST00000183622 195 ntBASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tsen54Q8C2A2 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms