Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Sh3rf2Q8BZT2 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3rf2Q8BZT2 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.56■□□□□ 0.08
Sh3rf2Q8BZT2 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3rf2Q8BZT2 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3rf2Q8BZT2 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3rf2Q8BZT2 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.56■□□□□ 0.08
Sh3rf2Q8BZT2 Mir1895-201ENSMUST00000122615 79 ntBASIC15.56■□□□□ 0.08
Sh3rf2Q8BZT2 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3rf2Q8BZT2 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.56■□□□□ 0.08
Sh3rf2Q8BZT2 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.56■□□□□ 0.08
Sh3rf2Q8BZT2 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3rf2Q8BZT2 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Sh3rf2Q8BZT2 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3rf2Q8BZT2 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3rf2Q8BZT2 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3rf2Q8BZT2 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.56■□□□□ 0.08
Sh3rf2Q8BZT2 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.56■□□□□ 0.08
Sh3rf2Q8BZT2 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3rf2Q8BZT2 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.56■□□□□ 0.08
Sh3rf2Q8BZT2 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3rf2Q8BZT2 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3rf2Q8BZT2 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Sh3rf2Q8BZT2 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf2Q8BZT2 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf2Q8BZT2 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Sh3rf2Q8BZT2 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf2Q8BZT2 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf2Q8BZT2 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Sh3rf2Q8BZT2 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.55■□□□□ 0.08
Sh3rf2Q8BZT2 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Sh3rf2Q8BZT2 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf2Q8BZT2 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf2Q8BZT2 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf2Q8BZT2 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Sh3rf2Q8BZT2 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf2Q8BZT2 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf2Q8BZT2 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf2Q8BZT2 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.55■□□□□ 0.08
Sh3rf2Q8BZT2 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.55■□□□□ 0.08
Sh3rf2Q8BZT2 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.55■□□□□ 0.08
Sh3rf2Q8BZT2 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.55■□□□□ 0.08
Sh3rf2Q8BZT2 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.55■□□□□ 0.08
Sh3rf2Q8BZT2 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf2Q8BZT2 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.55■□□□□ 0.08
Sh3rf2Q8BZT2 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.55■□□□□ 0.08
Sh3rf2Q8BZT2 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf2Q8BZT2 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Sh3rf2Q8BZT2 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf2Q8BZT2 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf2Q8BZT2 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf2Q8BZT2 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf2Q8BZT2 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf2Q8BZT2 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf2Q8BZT2 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.55■□□□□ 0.08
Sh3rf2Q8BZT2 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Sh3rf2Q8BZT2 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf2Q8BZT2 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf2Q8BZT2 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf2Q8BZT2 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Sh3rf2Q8BZT2 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.54■□□□□ 0.08
Sh3rf2Q8BZT2 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Sh3rf2Q8BZT2 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf2Q8BZT2 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Sh3rf2Q8BZT2 Gm14701-201ENSMUST00000117156 348 ntBASIC15.54■□□□□ 0.08
Sh3rf2Q8BZT2 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.54■□□□□ 0.08
Sh3rf2Q8BZT2 Gm11025-201ENSMUST00000140773 466 ntBASIC15.54■□□□□ 0.08
Sh3rf2Q8BZT2 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Sh3rf2Q8BZT2 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Sh3rf2Q8BZT2 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf2Q8BZT2 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf2Q8BZT2 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf2Q8BZT2 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf2Q8BZT2 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.54■□□□□ 0.08
Sh3rf2Q8BZT2 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Sh3rf2Q8BZT2 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf2Q8BZT2 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf2Q8BZT2 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.54■□□□□ 0.08
Sh3rf2Q8BZT2 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf2Q8BZT2 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.54■□□□□ 0.08
Sh3rf2Q8BZT2 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Sh3rf2Q8BZT2 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Sh3rf2Q8BZT2 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf2Q8BZT2 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf2Q8BZT2 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf2Q8BZT2 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Sh3rf2Q8BZT2 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.53■□□□□ 0.08
Sh3rf2Q8BZT2 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf2Q8BZT2 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf2Q8BZT2 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf2Q8BZT2 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf2Q8BZT2 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf2Q8BZT2 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Sh3rf2Q8BZT2 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.53■□□□□ 0.08
Sh3rf2Q8BZT2 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf2Q8BZT2 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Sh3rf2Q8BZT2 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf2Q8BZT2 Gm45612-201ENSMUST00000211320 160 ntBASIC15.53■□□□□ 0.08
Sh3rf2Q8BZT2 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Sh3rf2Q8BZT2 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms