Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.61□□□□□ -0.07
Cdk5rap1Q8BTW8 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Cdk5rap1Q8BTW8 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Cdk5rap1Q8BTW8 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdk5rap1Q8BTW8 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdk5rap1Q8BTW8 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cdk5rap1Q8BTW8 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdk5rap1Q8BTW8 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cdk5rap1Q8BTW8 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 Gm4995-201ENSMUST00000117247 432 ntBASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdk5rap1Q8BTW8 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.59□□□□□ -0.07
Cdk5rap1Q8BTW8 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdk5rap1Q8BTW8 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Cdk5rap1Q8BTW8 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.59□□□□□ -0.07
Cdk5rap1Q8BTW8 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdk5rap1Q8BTW8 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cdk5rap1Q8BTW8 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdk5rap1Q8BTW8 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cdk5rap1Q8BTW8 Gm14822-201ENSMUST00000122247 291 ntBASIC14.59□□□□□ -0.07
Cdk5rap1Q8BTW8 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.59□□□□□ -0.07
Cdk5rap1Q8BTW8 Gm17271-201ENSMUST00000165535 355 ntBASIC14.59□□□□□ -0.07
Cdk5rap1Q8BTW8 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.59□□□□□ -0.07
Cdk5rap1Q8BTW8 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cdk5rap1Q8BTW8 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Cdk5rap1Q8BTW8 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdk5rap1Q8BTW8 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdk5rap1Q8BTW8 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdk5rap1Q8BTW8 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.59□□□□□ -0.07
Cdk5rap1Q8BTW8 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdk5rap1Q8BTW8 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdk5rap1Q8BTW8 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.59□□□□□ -0.07
Cdk5rap1Q8BTW8 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdk5rap1Q8BTW8 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdk5rap1Q8BTW8 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdk5rap1Q8BTW8 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdk5rap1Q8BTW8 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdk5rap1Q8BTW8 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cdk5rap1Q8BTW8 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Cdk5rap1Q8BTW8 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdk5rap1Q8BTW8 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cdk5rap1Q8BTW8 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cdk5rap1Q8BTW8 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cdk5rap1Q8BTW8 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cdk5rap1Q8BTW8 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cdk5rap1Q8BTW8 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.58□□□□□ -0.07
Cdk5rap1Q8BTW8 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cdk5rap1Q8BTW8 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cdk5rap1Q8BTW8 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdk5rap1Q8BTW8 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdk5rap1Q8BTW8 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.58□□□□□ -0.08
Cdk5rap1Q8BTW8 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.58□□□□□ -0.08
Cdk5rap1Q8BTW8 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.58□□□□□ -0.08
Cdk5rap1Q8BTW8 Gm13597-201ENSMUST00000121239 375 ntBASIC14.58□□□□□ -0.08
Cdk5rap1Q8BTW8 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Cdk5rap1Q8BTW8 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdk5rap1Q8BTW8 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.58□□□□□ -0.08
Cdk5rap1Q8BTW8 Gm25911-201ENSMUST00000157621 56 ntBASIC14.58□□□□□ -0.08
Cdk5rap1Q8BTW8 Gm18246-201ENSMUST00000221023 728 ntBASIC14.58□□□□□ -0.08
Cdk5rap1Q8BTW8 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdk5rap1Q8BTW8 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms