Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rd3Q8BRE0 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rd3Q8BRE0 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rd3Q8BRE0 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rd3Q8BRE0 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rd3Q8BRE0 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rd3Q8BRE0 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rd3Q8BRE0 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rd3Q8BRE0 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rd3Q8BRE0 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rd3Q8BRE0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Rd3Q8BRE0 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Rd3Q8BRE0 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.28■□□□□ 0.2
Rd3Q8BRE0 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rd3Q8BRE0 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.28■□□□□ 0.2
Rd3Q8BRE0 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rd3Q8BRE0 Gm8318-201ENSMUST00000182954 872 ntBASIC16.28■□□□□ 0.2
Rd3Q8BRE0 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.28■□□□□ 0.2
Rd3Q8BRE0 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.28■□□□□ 0.2
Rd3Q8BRE0 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rd3Q8BRE0 AC158982.1-201ENSMUST00000228377 901 ntBASIC16.28■□□□□ 0.2
Rd3Q8BRE0 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rd3Q8BRE0 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rd3Q8BRE0 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rd3Q8BRE0 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rd3Q8BRE0 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rd3Q8BRE0 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rd3Q8BRE0 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.28■□□□□ 0.2
Rd3Q8BRE0 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rd3Q8BRE0 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rd3Q8BRE0 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rd3Q8BRE0 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rd3Q8BRE0 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Rd3Q8BRE0 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rd3Q8BRE0 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rd3Q8BRE0 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.27■□□□□ 0.2
Rd3Q8BRE0 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rd3Q8BRE0 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Rd3Q8BRE0 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.27■□□□□ 0.2
Rd3Q8BRE0 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rd3Q8BRE0 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
Rd3Q8BRE0 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Rd3Q8BRE0 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rd3Q8BRE0 Gm12008-201ENSMUST00000117791 755 ntBASIC16.27■□□□□ 0.2
Rd3Q8BRE0 Gm13616-201ENSMUST00000120600 222 ntBASIC16.27■□□□□ 0.2
Rd3Q8BRE0 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rd3Q8BRE0 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.27■□□□□ 0.2
Rd3Q8BRE0 Gm10499-201ENSMUST00000174094 934 ntBASIC16.27■□□□□ 0.2
Rd3Q8BRE0 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.27■□□□□ 0.2
Rd3Q8BRE0 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rd3Q8BRE0 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.27■□□□□ 0.2
Rd3Q8BRE0 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rd3Q8BRE0 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rd3Q8BRE0 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.27■□□□□ 0.2
Rd3Q8BRE0 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rd3Q8BRE0 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Rd3Q8BRE0 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.27■□□□□ 0.2
Rd3Q8BRE0 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.27■□□□□ 0.19
Rd3Q8BRE0 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.27■□□□□ 0.19
Rd3Q8BRE0 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rd3Q8BRE0 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Rd3Q8BRE0 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rd3Q8BRE0 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rd3Q8BRE0 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rd3Q8BRE0 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rd3Q8BRE0 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.27■□□□□ 0.19
Rd3Q8BRE0 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rd3Q8BRE0 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rd3Q8BRE0 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rd3Q8BRE0 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rd3Q8BRE0 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Rd3Q8BRE0 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.26■□□□□ 0.19
Rd3Q8BRE0 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rd3Q8BRE0 Gm9385-201ENSMUST00000117563 472 ntBASIC16.26■□□□□ 0.19
Rd3Q8BRE0 Gm14057-201ENSMUST00000120631 482 ntBASIC16.26■□□□□ 0.19
Rd3Q8BRE0 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rd3Q8BRE0 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rd3Q8BRE0 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.26■□□□□ 0.19
Rd3Q8BRE0 Gm5312-201ENSMUST00000203728 547 ntBASIC16.26■□□□□ 0.19
Rd3Q8BRE0 Gm45612-201ENSMUST00000211320 160 ntBASIC16.26■□□□□ 0.19
Rd3Q8BRE0 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rd3Q8BRE0 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rd3Q8BRE0 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rd3Q8BRE0 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rd3Q8BRE0 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Rd3Q8BRE0 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Rd3Q8BRE0 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rd3Q8BRE0 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rd3Q8BRE0 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rd3Q8BRE0 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rd3Q8BRE0 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rd3Q8BRE0 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rd3Q8BRE0 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rd3Q8BRE0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rd3Q8BRE0 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rd3Q8BRE0 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rd3Q8BRE0 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rd3Q8BRE0 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rd3Q8BRE0 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rd3Q8BRE0 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms