Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nhlrc1Q8BR37 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC11.96□□□□□ -0.5
Nhlrc1Q8BR37 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nhlrc1Q8BR37 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nhlrc1Q8BR37 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Nhlrc1Q8BR37 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nhlrc1Q8BR37 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 AC174742.1-201ENSMUST00000218272 304 ntBASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Nhlrc1Q8BR37 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Rubie-203ENSMUST00000227803 2430 ntBASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc1Q8BR37 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nhlrc1Q8BR37 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nhlrc1Q8BR37 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC11.93□□□□□ -0.5
Nhlrc1Q8BR37 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC11.93□□□□□ -0.5
Nhlrc1Q8BR37 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nhlrc1Q8BR37 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Nhlrc1Q8BR37 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nhlrc1Q8BR37 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nhlrc1Q8BR37 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nhlrc1Q8BR37 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC11.93□□□□□ -0.5
Nhlrc1Q8BR37 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms