Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col16a1Q8BLX7 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col16a1Q8BLX7 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col16a1Q8BLX7 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col16a1Q8BLX7 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.96■□□□□ 0.79
Col16a1Q8BLX7 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col16a1Q8BLX7 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC19.95■□□□□ 0.78
Col16a1Q8BLX7 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC19.95■□□□□ 0.78
Col16a1Q8BLX7 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC19.95■□□□□ 0.78
Col16a1Q8BLX7 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col16a1Q8BLX7 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col16a1Q8BLX7 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col16a1Q8BLX7 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col16a1Q8BLX7 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col16a1Q8BLX7 Gm15222-202ENSMUST00000228667 1726 ntBASIC19.95■□□□□ 0.78
Col16a1Q8BLX7 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col16a1Q8BLX7 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col16a1Q8BLX7 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Col16a1Q8BLX7 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC19.95■□□□□ 0.78
Col16a1Q8BLX7 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Col16a1Q8BLX7 Gm9719-201ENSMUST00000162765 543 ntBASIC19.95■□□□□ 0.78
Col16a1Q8BLX7 Gm18187-201ENSMUST00000196476 984 ntBASIC19.95■□□□□ 0.78
Col16a1Q8BLX7 Gm6218-201ENSMUST00000219812 628 ntBASIC19.95■□□□□ 0.78
Col16a1Q8BLX7 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC19.95■□□□□ 0.78
Col16a1Q8BLX7 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col16a1Q8BLX7 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col16a1Q8BLX7 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col16a1Q8BLX7 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col16a1Q8BLX7 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col16a1Q8BLX7 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Col16a1Q8BLX7 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col16a1Q8BLX7 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC19.94■□□□□ 0.78
Col16a1Q8BLX7 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC19.94■□□□□ 0.78
Col16a1Q8BLX7 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Col16a1Q8BLX7 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col16a1Q8BLX7 Gm43703-201ENSMUST00000200523 763 ntBASIC19.94■□□□□ 0.78
Col16a1Q8BLX7 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col16a1Q8BLX7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col16a1Q8BLX7 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.94■□□□□ 0.78
Col16a1Q8BLX7 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC19.94■□□□□ 0.78
Col16a1Q8BLX7 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col16a1Q8BLX7 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col16a1Q8BLX7 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col16a1Q8BLX7 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
Col16a1Q8BLX7 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col16a1Q8BLX7 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Col16a1Q8BLX7 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Col16a1Q8BLX7 Gm43433-201ENSMUST00000196573 481 ntBASIC19.93■□□□□ 0.78
Col16a1Q8BLX7 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Col16a1Q8BLX7 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC19.93■□□□□ 0.78
Col16a1Q8BLX7 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col16a1Q8BLX7 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col16a1Q8BLX7 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Col16a1Q8BLX7 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Col16a1Q8BLX7 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col16a1Q8BLX7 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Col16a1Q8BLX7 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Col16a1Q8BLX7 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Col16a1Q8BLX7 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col16a1Q8BLX7 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Col16a1Q8BLX7 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Col16a1Q8BLX7 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col16a1Q8BLX7 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col16a1Q8BLX7 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Col16a1Q8BLX7 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col16a1Q8BLX7 Gm5357-201ENSMUST00000212720 1924 ntBASIC19.92■□□□□ 0.78
Col16a1Q8BLX7 Gm15163-201ENSMUST00000120749 1302 ntBASIC19.92■□□□□ 0.78
Col16a1Q8BLX7 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.92■□□□□ 0.78
Col16a1Q8BLX7 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col16a1Q8BLX7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col16a1Q8BLX7 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col16a1Q8BLX7 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Col16a1Q8BLX7 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col16a1Q8BLX7 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col16a1Q8BLX7 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.91■□□□□ 0.78
Col16a1Q8BLX7 Gm24543-201ENSMUST00000103867 82 ntBASIC19.91■□□□□ 0.78
Col16a1Q8BLX7 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col16a1Q8BLX7 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col16a1Q8BLX7 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Col16a1Q8BLX7 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC19.91■□□□□ 0.78
Col16a1Q8BLX7 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC19.91■□□□□ 0.78
Col16a1Q8BLX7 AC154239.3-201ENSMUST00000226933 674 ntBASIC19.91■□□□□ 0.78
Col16a1Q8BLX7 Gm6180-201ENSMUST00000065243 498 ntBASIC19.91■□□□□ 0.78
Col16a1Q8BLX7 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col16a1Q8BLX7 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC19.91■□□□□ 0.78
Col16a1Q8BLX7 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Col16a1Q8BLX7 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Col16a1Q8BLX7 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col16a1Q8BLX7 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col16a1Q8BLX7 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Col16a1Q8BLX7 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Col16a1Q8BLX7 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col16a1Q8BLX7 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col16a1Q8BLX7 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col16a1Q8BLX7 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col16a1Q8BLX7 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC19.91■□□□□ 0.78
Col16a1Q8BLX7 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col16a1Q8BLX7 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col16a1Q8BLX7 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col16a1Q8BLX7 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms