Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp1Q8BJQ2 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp1Q8BJQ2 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Usp1Q8BJQ2 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Usp1Q8BJQ2 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Usp1Q8BJQ2 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Usp1Q8BJQ2 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp1Q8BJQ2 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp1Q8BJQ2 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp1Q8BJQ2 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Usp1Q8BJQ2 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp1Q8BJQ2 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.34■□□□□ 0.21
Usp1Q8BJQ2 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp1Q8BJQ2 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp1Q8BJQ2 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Usp1Q8BJQ2 Gm14701-201ENSMUST00000117156 348 ntBASIC16.34■□□□□ 0.21
Usp1Q8BJQ2 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.34■□□□□ 0.21
Usp1Q8BJQ2 Gm27301-201ENSMUST00000184012 127 ntBASIC16.34■□□□□ 0.21
Usp1Q8BJQ2 Gm27494-201ENSMUST00000184735 189 ntBASIC16.34■□□□□ 0.21
Usp1Q8BJQ2 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.34■□□□□ 0.21
Usp1Q8BJQ2 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp1Q8BJQ2 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.34■□□□□ 0.21
Usp1Q8BJQ2 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
Usp1Q8BJQ2 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Usp1Q8BJQ2 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp1Q8BJQ2 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Usp1Q8BJQ2 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp1Q8BJQ2 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp1Q8BJQ2 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp1Q8BJQ2 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Usp1Q8BJQ2 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp1Q8BJQ2 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp1Q8BJQ2 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Usp1Q8BJQ2 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Usp1Q8BJQ2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Usp1Q8BJQ2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.33■□□□□ 0.21
Usp1Q8BJQ2 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Usp1Q8BJQ2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Usp1Q8BJQ2 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Usp1Q8BJQ2 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp1Q8BJQ2 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp1Q8BJQ2 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.33■□□□□ 0.2
Usp1Q8BJQ2 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Usp1Q8BJQ2 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.33■□□□□ 0.2
Usp1Q8BJQ2 Gm17968-201ENSMUST00000194902 784 ntBASIC16.33■□□□□ 0.2
Usp1Q8BJQ2 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.33■□□□□ 0.2
Usp1Q8BJQ2 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
Usp1Q8BJQ2 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp1Q8BJQ2 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Usp1Q8BJQ2 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp1Q8BJQ2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp1Q8BJQ2 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Usp1Q8BJQ2 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp1Q8BJQ2 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp1Q8BJQ2 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Usp1Q8BJQ2 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Usp1Q8BJQ2 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp1Q8BJQ2 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp1Q8BJQ2 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Usp1Q8BJQ2 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp1Q8BJQ2 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp1Q8BJQ2 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp1Q8BJQ2 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp1Q8BJQ2 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp1Q8BJQ2 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp1Q8BJQ2 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp1Q8BJQ2 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp1Q8BJQ2 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp1Q8BJQ2 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Usp1Q8BJQ2 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.32■□□□□ 0.2
Usp1Q8BJQ2 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Usp1Q8BJQ2 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Usp1Q8BJQ2 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Usp1Q8BJQ2 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp1Q8BJQ2 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Usp1Q8BJQ2 Auts2-212ENSMUST00000178555 309 ntBASIC16.32■□□□□ 0.2
Usp1Q8BJQ2 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Usp1Q8BJQ2 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.32■□□□□ 0.2
Usp1Q8BJQ2 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.32■□□□□ 0.2
Usp1Q8BJQ2 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp1Q8BJQ2 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.32■□□□□ 0.2
Usp1Q8BJQ2 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.32■□□□□ 0.2
Usp1Q8BJQ2 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Usp1Q8BJQ2 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp1Q8BJQ2 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp1Q8BJQ2 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp1Q8BJQ2 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.32■□□□□ 0.2
Usp1Q8BJQ2 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp1Q8BJQ2 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Usp1Q8BJQ2 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp1Q8BJQ2 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.32■□□□□ 0.2
Usp1Q8BJQ2 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp1Q8BJQ2 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Usp1Q8BJQ2 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.31■□□□□ 0.2
Usp1Q8BJQ2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.31■□□□□ 0.2
Usp1Q8BJQ2 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp1Q8BJQ2 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp1Q8BJQ2 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Usp1Q8BJQ2 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Usp1Q8BJQ2 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms