Protein–RNA interactions for Protein: Q8BJM3

R3hcc1l, Coiled-coil domain-containing protein R3HCC1L, mousemouse

Known RBP Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hcc1lQ8BJM3 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
R3hcc1lQ8BJM3 Sybu-209ENSMUST00000228639 4113 ntBASIC15.17■□□□□ 0.02
R3hcc1lQ8BJM3 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.17■□□□□ 0.02
R3hcc1lQ8BJM3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
R3hcc1lQ8BJM3 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
R3hcc1lQ8BJM3 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
R3hcc1lQ8BJM3 Gm27357-201ENSMUST00000183754 135 ntBASIC15.17■□□□□ 0.02
R3hcc1lQ8BJM3 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.17■□□□□ 0.02
R3hcc1lQ8BJM3 Gm8655-201ENSMUST00000221159 852 ntBASIC15.17■□□□□ 0.02
R3hcc1lQ8BJM3 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.17■□□□□ 0.02
R3hcc1lQ8BJM3 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
R3hcc1lQ8BJM3 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
R3hcc1lQ8BJM3 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
R3hcc1lQ8BJM3 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
R3hcc1lQ8BJM3 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
R3hcc1lQ8BJM3 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
R3hcc1lQ8BJM3 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
R3hcc1lQ8BJM3 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
R3hcc1lQ8BJM3 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
R3hcc1lQ8BJM3 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
R3hcc1lQ8BJM3 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
R3hcc1lQ8BJM3 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
R3hcc1lQ8BJM3 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
R3hcc1lQ8BJM3 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
R3hcc1lQ8BJM3 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
R3hcc1lQ8BJM3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
R3hcc1lQ8BJM3 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
R3hcc1lQ8BJM3 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
R3hcc1lQ8BJM3 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.16■□□□□ 0.02
R3hcc1lQ8BJM3 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
R3hcc1lQ8BJM3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
R3hcc1lQ8BJM3 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
R3hcc1lQ8BJM3 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
R3hcc1lQ8BJM3 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.16■□□□□ 0.02
R3hcc1lQ8BJM3 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.16■□□□□ 0.02
R3hcc1lQ8BJM3 Ank2-226ENSMUST00000189368 339 ntBASIC15.16■□□□□ 0.02
R3hcc1lQ8BJM3 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
R3hcc1lQ8BJM3 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
R3hcc1lQ8BJM3 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
R3hcc1lQ8BJM3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
R3hcc1lQ8BJM3 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
R3hcc1lQ8BJM3 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
R3hcc1lQ8BJM3 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
R3hcc1lQ8BJM3 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
R3hcc1lQ8BJM3 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
R3hcc1lQ8BJM3 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
R3hcc1lQ8BJM3 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
R3hcc1lQ8BJM3 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
R3hcc1lQ8BJM3 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
R3hcc1lQ8BJM3 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
R3hcc1lQ8BJM3 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
R3hcc1lQ8BJM3 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
R3hcc1lQ8BJM3 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
R3hcc1lQ8BJM3 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
R3hcc1lQ8BJM3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
R3hcc1lQ8BJM3 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
R3hcc1lQ8BJM3 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
R3hcc1lQ8BJM3 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
R3hcc1lQ8BJM3 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
R3hcc1lQ8BJM3 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
R3hcc1lQ8BJM3 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
R3hcc1lQ8BJM3 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
R3hcc1lQ8BJM3 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
R3hcc1lQ8BJM3 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
R3hcc1lQ8BJM3 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.15■□□□□ 0.02
R3hcc1lQ8BJM3 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.15■□□□□ 0.02
R3hcc1lQ8BJM3 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
R3hcc1lQ8BJM3 Gm27867-201ENSMUST00000184778 125 ntBASIC15.15■□□□□ 0.02
R3hcc1lQ8BJM3 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.15■□□□□ 0.02
R3hcc1lQ8BJM3 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.15■□□□□ 0.02
R3hcc1lQ8BJM3 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
R3hcc1lQ8BJM3 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
R3hcc1lQ8BJM3 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
R3hcc1lQ8BJM3 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
R3hcc1lQ8BJM3 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
R3hcc1lQ8BJM3 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
R3hcc1lQ8BJM3 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
R3hcc1lQ8BJM3 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
R3hcc1lQ8BJM3 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
R3hcc1lQ8BJM3 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
R3hcc1lQ8BJM3 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
R3hcc1lQ8BJM3 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
R3hcc1lQ8BJM3 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
R3hcc1lQ8BJM3 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
R3hcc1lQ8BJM3 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
R3hcc1lQ8BJM3 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
R3hcc1lQ8BJM3 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
R3hcc1lQ8BJM3 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
R3hcc1lQ8BJM3 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
R3hcc1lQ8BJM3 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.14■□□□□ 0.01
R3hcc1lQ8BJM3 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
R3hcc1lQ8BJM3 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
R3hcc1lQ8BJM3 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
R3hcc1lQ8BJM3 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
R3hcc1lQ8BJM3 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
R3hcc1lQ8BJM3 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.14■□□□□ 0.01
R3hcc1lQ8BJM3 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
R3hcc1lQ8BJM3 Gm17807-201ENSMUST00000186869 298 ntBASIC15.14■□□□□ 0.01
R3hcc1lQ8BJM3 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
R3hcc1lQ8BJM3 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms