Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prdm4Q80V63 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.04■□□□□ 0.16
Prdm4Q80V63 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prdm4Q80V63 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prdm4Q80V63 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prdm4Q80V63 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prdm4Q80V63 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.04■□□□□ 0.16
Prdm4Q80V63 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.04■□□□□ 0.16
Prdm4Q80V63 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Prdm4Q80V63 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prdm4Q80V63 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.04■□□□□ 0.16
Prdm4Q80V63 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Prdm4Q80V63 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prdm4Q80V63 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prdm4Q80V63 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prdm4Q80V63 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Prdm4Q80V63 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.04■□□□□ 0.16
Prdm4Q80V63 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prdm4Q80V63 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Prdm4Q80V63 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Prdm4Q80V63 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prdm4Q80V63 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prdm4Q80V63 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Prdm4Q80V63 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prdm4Q80V63 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prdm4Q80V63 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Prdm4Q80V63 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC16.03■□□□□ 0.16
Prdm4Q80V63 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Prdm4Q80V63 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prdm4Q80V63 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.03■□□□□ 0.16
Prdm4Q80V63 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Prdm4Q80V63 Gm6659-201ENSMUST00000174752 547 ntBASIC16.03■□□□□ 0.16
Prdm4Q80V63 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Prdm4Q80V63 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Prdm4Q80V63 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Prdm4Q80V63 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prdm4Q80V63 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prdm4Q80V63 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Prdm4Q80V63 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Prdm4Q80V63 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Prdm4Q80V63 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Prdm4Q80V63 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prdm4Q80V63 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prdm4Q80V63 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prdm4Q80V63 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prdm4Q80V63 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prdm4Q80V63 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prdm4Q80V63 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prdm4Q80V63 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Prdm4Q80V63 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Prdm4Q80V63 Mbnl2-204ENSMUST00000227012 2390 ntBASIC16.02■□□□□ 0.16
Prdm4Q80V63 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Prdm4Q80V63 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Prdm4Q80V63 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prdm4Q80V63 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Prdm4Q80V63 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Prdm4Q80V63 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prdm4Q80V63 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prdm4Q80V63 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prdm4Q80V63 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Prdm4Q80V63 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Prdm4Q80V63 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prdm4Q80V63 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Prdm4Q80V63 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Prdm4Q80V63 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.02■□□□□ 0.16
Prdm4Q80V63 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prdm4Q80V63 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.02■□□□□ 0.16
Prdm4Q80V63 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.02■□□□□ 0.16
Prdm4Q80V63 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Prdm4Q80V63 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.02■□□□□ 0.16
Prdm4Q80V63 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.02■□□□□ 0.16
Prdm4Q80V63 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prdm4Q80V63 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prdm4Q80V63 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prdm4Q80V63 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Prdm4Q80V63 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Prdm4Q80V63 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Prdm4Q80V63 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Prdm4Q80V63 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Prdm4Q80V63 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Prdm4Q80V63 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Prdm4Q80V63 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Prdm4Q80V63 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Prdm4Q80V63 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Prdm4Q80V63 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prdm4Q80V63 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Prdm4Q80V63 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prdm4Q80V63 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Prdm4Q80V63 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prdm4Q80V63 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Prdm4Q80V63 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.01■□□□□ 0.15
Prdm4Q80V63 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Prdm4Q80V63 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prdm4Q80V63 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.01■□□□□ 0.15
Prdm4Q80V63 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prdm4Q80V63 Gm27389-201ENSMUST00000183622 195 ntBASIC16.01■□□□□ 0.15
Prdm4Q80V63 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.01■□□□□ 0.15
Prdm4Q80V63 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prdm4Q80V63 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Prdm4Q80V63 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms