Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Sned1Q70E20 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Sned1Q70E20 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sned1Q70E20 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sned1Q70E20 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sned1Q70E20 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.35■□□□□ 0.53
Sned1Q70E20 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sned1Q70E20 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sned1Q70E20 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sned1Q70E20 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sned1Q70E20 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Sned1Q70E20 Gm11425-201ENSMUST00000119608 498 ntBASIC18.35■□□□□ 0.53
Sned1Q70E20 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sned1Q70E20 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC18.35■□□□□ 0.53
Sned1Q70E20 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC18.35■□□□□ 0.53
Sned1Q70E20 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sned1Q70E20 Gm9396-201ENSMUST00000076703 567 ntBASIC18.35■□□□□ 0.53
Sned1Q70E20 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Sned1Q70E20 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sned1Q70E20 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sned1Q70E20 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sned1Q70E20 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sned1Q70E20 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sned1Q70E20 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.35■□□□□ 0.53
Sned1Q70E20 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sned1Q70E20 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sned1Q70E20 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sned1Q70E20 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sned1Q70E20 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sned1Q70E20 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sned1Q70E20 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sned1Q70E20 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sned1Q70E20 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sned1Q70E20 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sned1Q70E20 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Sned1Q70E20 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Sned1Q70E20 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC18.34■□□□□ 0.53
Sned1Q70E20 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC18.34■□□□□ 0.53
Sned1Q70E20 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sned1Q70E20 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC18.34■□□□□ 0.53
Sned1Q70E20 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Sned1Q70E20 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sned1Q70E20 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sned1Q70E20 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sned1Q70E20 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sned1Q70E20 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sned1Q70E20 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.34■□□□□ 0.53
Sned1Q70E20 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Sned1Q70E20 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sned1Q70E20 Gm15678-201ENSMUST00000117573 960 ntBASIC18.33■□□□□ 0.53
Sned1Q70E20 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Sned1Q70E20 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Sned1Q70E20 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Sned1Q70E20 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Sned1Q70E20 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC18.33■□□□□ 0.53
Sned1Q70E20 AC166349.1-201ENSMUST00000220866 695 ntBASIC18.33■□□□□ 0.53
Sned1Q70E20 AC149588.3-201ENSMUST00000227515 150 ntBASIC18.33■□□□□ 0.53
Sned1Q70E20 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sned1Q70E20 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sned1Q70E20 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Sned1Q70E20 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sned1Q70E20 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sned1Q70E20 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC18.33■□□□□ 0.52
Sned1Q70E20 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sned1Q70E20 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
Sned1Q70E20 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sned1Q70E20 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sned1Q70E20 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sned1Q70E20 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC18.33■□□□□ 0.52
Sned1Q70E20 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Sned1Q70E20 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sned1Q70E20 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Sned1Q70E20 Gm12960-201ENSMUST00000120017 1066 ntBASIC18.32■□□□□ 0.52
Sned1Q70E20 Gm7820-201ENSMUST00000121012 1052 ntBASIC18.32■□□□□ 0.52
Sned1Q70E20 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC18.32■□□□□ 0.52
Sned1Q70E20 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC18.32■□□□□ 0.52
Sned1Q70E20 AC238811.3-201ENSMUST00000225422 709 ntBASIC18.32■□□□□ 0.52
Sned1Q70E20 AC156016.3-201ENSMUST00000228623 344 ntBASIC18.32■□□□□ 0.52
Sned1Q70E20 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Sned1Q70E20 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC18.32■□□□□ 0.52
Sned1Q70E20 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sned1Q70E20 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sned1Q70E20 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sned1Q70E20 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Sned1Q70E20 AC131068.2-201ENSMUST00000226175 1453 ntBASIC18.32■□□□□ 0.52
Sned1Q70E20 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sned1Q70E20 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sned1Q70E20 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Sned1Q70E20 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sned1Q70E20 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sned1Q70E20 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sned1Q70E20 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sned1Q70E20 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC18.32■□□□□ 0.52
Sned1Q70E20 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sned1Q70E20 Ldha-ps-201ENSMUST00000119390 995 ntBASIC18.32■□□□□ 0.52
Sned1Q70E20 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC18.32■□□□□ 0.52
Sned1Q70E20 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sned1Q70E20 Gm9229-201ENSMUST00000222777 126 ntBASIC18.32■□□□□ 0.52
Sned1Q70E20 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Sned1Q70E20 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms