Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtl3Q6P1Y1 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Rtl3Q6P1Y1 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtl3Q6P1Y1 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtl3Q6P1Y1 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtl3Q6P1Y1 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtl3Q6P1Y1 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtl3Q6P1Y1 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtl3Q6P1Y1 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtl3Q6P1Y1 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtl3Q6P1Y1 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Rtl3Q6P1Y1 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtl3Q6P1Y1 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rtl3Q6P1Y1 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtl3Q6P1Y1 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rtl3Q6P1Y1 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Rtl3Q6P1Y1 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtl3Q6P1Y1 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rtl3Q6P1Y1 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rtl3Q6P1Y1 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.88■□□□□ 0.13
Rtl3Q6P1Y1 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rtl3Q6P1Y1 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rtl3Q6P1Y1 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rtl3Q6P1Y1 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rtl3Q6P1Y1 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Rtl3Q6P1Y1 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Rtl3Q6P1Y1 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.88■□□□□ 0.13
Rtl3Q6P1Y1 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Rtl3Q6P1Y1 Gm14722-201ENSMUST00000118943 689 ntBASIC15.88■□□□□ 0.13
Rtl3Q6P1Y1 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rtl3Q6P1Y1 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.88■□□□□ 0.13
Rtl3Q6P1Y1 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rtl3Q6P1Y1 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rtl3Q6P1Y1 Gm27628-201ENSMUST00000184911 107 ntBASIC15.88■□□□□ 0.13
Rtl3Q6P1Y1 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.88■□□□□ 0.13
Rtl3Q6P1Y1 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.88■□□□□ 0.13
Rtl3Q6P1Y1 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rtl3Q6P1Y1 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rtl3Q6P1Y1 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.88■□□□□ 0.13
Rtl3Q6P1Y1 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rtl3Q6P1Y1 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rtl3Q6P1Y1 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rtl3Q6P1Y1 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rtl3Q6P1Y1 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.88■□□□□ 0.13
Rtl3Q6P1Y1 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rtl3Q6P1Y1 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rtl3Q6P1Y1 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Rtl3Q6P1Y1 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Rtl3Q6P1Y1 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rtl3Q6P1Y1 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rtl3Q6P1Y1 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rtl3Q6P1Y1 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rtl3Q6P1Y1 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Rtl3Q6P1Y1 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rtl3Q6P1Y1 Gm14140-201ENSMUST00000119999 995 ntBASIC15.87■□□□□ 0.13
Rtl3Q6P1Y1 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rtl3Q6P1Y1 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.87■□□□□ 0.13
Rtl3Q6P1Y1 Gm45167-201ENSMUST00000208007 322 ntBASIC15.87■□□□□ 0.13
Rtl3Q6P1Y1 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Rtl3Q6P1Y1 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rtl3Q6P1Y1 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Rtl3Q6P1Y1 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rtl3Q6P1Y1 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rtl3Q6P1Y1 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rtl3Q6P1Y1 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rtl3Q6P1Y1 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rtl3Q6P1Y1 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rtl3Q6P1Y1 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rtl3Q6P1Y1 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rtl3Q6P1Y1 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rtl3Q6P1Y1 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rtl3Q6P1Y1 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Rtl3Q6P1Y1 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
Rtl3Q6P1Y1 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rtl3Q6P1Y1 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rtl3Q6P1Y1 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rtl3Q6P1Y1 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.86■□□□□ 0.13
Rtl3Q6P1Y1 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rtl3Q6P1Y1 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rtl3Q6P1Y1 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Rtl3Q6P1Y1 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rtl3Q6P1Y1 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Rtl3Q6P1Y1 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rtl3Q6P1Y1 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.86■□□□□ 0.13
Rtl3Q6P1Y1 Gm14494-201ENSMUST00000118786 435 ntBASIC15.86■□□□□ 0.13
Rtl3Q6P1Y1 Gm12260-201ENSMUST00000122447 411 ntBASIC15.86■□□□□ 0.13
Rtl3Q6P1Y1 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.86■□□□□ 0.13
Rtl3Q6P1Y1 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rtl3Q6P1Y1 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rtl3Q6P1Y1 Gm6736-201ENSMUST00000166583 948 ntBASIC15.86■□□□□ 0.13
Rtl3Q6P1Y1 Gm18489-201ENSMUST00000172565 551 ntBASIC15.86■□□□□ 0.13
Rtl3Q6P1Y1 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Rtl3Q6P1Y1 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rtl3Q6P1Y1 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.86■□□□□ 0.13
Rtl3Q6P1Y1 Gm43575-201ENSMUST00000196420 516 ntBASIC15.86■□□□□ 0.13
Rtl3Q6P1Y1 Gm9682-201ENSMUST00000197505 556 ntBASIC15.86■□□□□ 0.13
Rtl3Q6P1Y1 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.86■□□□□ 0.13
Rtl3Q6P1Y1 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rtl3Q6P1Y1 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rtl3Q6P1Y1 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms