Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ctr9Q62018 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ctr9Q62018 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ctr9Q62018 Gm13294-201ENSMUST00000121757 1330 ntBASIC18.12■□□□□ 0.49
Ctr9Q62018 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ctr9Q62018 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ctr9Q62018 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ctr9Q62018 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Ctr9Q62018 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ctr9Q62018 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Ctr9Q62018 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.12■□□□□ 0.49
Ctr9Q62018 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ctr9Q62018 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ctr9Q62018 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ctr9Q62018 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Ctr9Q62018 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ctr9Q62018 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Ctr9Q62018 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ctr9Q62018 Gm11453-201ENSMUST00000117318 1007 ntBASIC18.11■□□□□ 0.49
Ctr9Q62018 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ctr9Q62018 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ctr9Q62018 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ctr9Q62018 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC18.11■□□□□ 0.49
Ctr9Q62018 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Ctr9Q62018 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ctr9Q62018 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ctr9Q62018 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ctr9Q62018 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ctr9Q62018 Gm10175-201ENSMUST00000086013 645 ntBASIC18.11■□□□□ 0.49
Ctr9Q62018 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ctr9Q62018 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Ctr9Q62018 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.11■□□□□ 0.49
Ctr9Q62018 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ctr9Q62018 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ctr9Q62018 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ctr9Q62018 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ctr9Q62018 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
Ctr9Q62018 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ctr9Q62018 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Ctr9Q62018 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ctr9Q62018 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ctr9Q62018 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ctr9Q62018 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ctr9Q62018 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.1■□□□□ 0.49
Ctr9Q62018 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC18.1■□□□□ 0.49
Ctr9Q62018 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.1■□□□□ 0.49
Ctr9Q62018 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ctr9Q62018 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ctr9Q62018 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.1■□□□□ 0.49
Ctr9Q62018 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Ctr9Q62018 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ctr9Q62018 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ctr9Q62018 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ctr9Q62018 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ctr9Q62018 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ctr9Q62018 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ctr9Q62018 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Ctr9Q62018 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ctr9Q62018 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ctr9Q62018 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ctr9Q62018 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.09■□□□□ 0.49
Ctr9Q62018 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Ctr9Q62018 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ctr9Q62018 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ctr9Q62018 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ctr9Q62018 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ctr9Q62018 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ctr9Q62018 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.09■□□□□ 0.49
Ctr9Q62018 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.09■□□□□ 0.49
Ctr9Q62018 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.09■□□□□ 0.49
Ctr9Q62018 AC119177.1-201ENSMUST00000227647 1332 ntBASIC18.09■□□□□ 0.49
Ctr9Q62018 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.09■□□□□ 0.49
Ctr9Q62018 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ctr9Q62018 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ctr9Q62018 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ctr9Q62018 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ctr9Q62018 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ctr9Q62018 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Ctr9Q62018 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ctr9Q62018 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.09■□□□□ 0.49
Ctr9Q62018 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ctr9Q62018 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ctr9Q62018 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ctr9Q62018 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ctr9Q62018 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ctr9Q62018 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Ctr9Q62018 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ctr9Q62018 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ctr9Q62018 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ctr9Q62018 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ctr9Q62018 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ctr9Q62018 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.08■□□□□ 0.48
Ctr9Q62018 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ctr9Q62018 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ctr9Q62018 Mir3113-201ENSMUST00000175478 76 ntBASIC18.08■□□□□ 0.48
Ctr9Q62018 Mir8117-201ENSMUST00000184773 107 ntBASIC18.08■□□□□ 0.48
Ctr9Q62018 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC18.08■□□□□ 0.48
Ctr9Q62018 Gm43073-201ENSMUST00000198200 1189 ntBASIC18.08■□□□□ 0.48
Ctr9Q62018 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.08■□□□□ 0.48
Ctr9Q62018 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms