Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ift88Q61371 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.04■□□□□ 0.32
Ift88Q61371 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ift88Q61371 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Ift88Q61371 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ift88Q61371 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ift88Q61371 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ift88Q61371 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ift88Q61371 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ift88Q61371 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ift88Q61371 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ift88Q61371 Gm14722-201ENSMUST00000118943 689 ntBASIC17.04■□□□□ 0.32
Ift88Q61371 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.04■□□□□ 0.32
Ift88Q61371 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ift88Q61371 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Ift88Q61371 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ift88Q61371 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ift88Q61371 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ift88Q61371 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ift88Q61371 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.04■□□□□ 0.32
Ift88Q61371 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ift88Q61371 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ift88Q61371 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ift88Q61371 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.04■□□□□ 0.32
Ift88Q61371 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ift88Q61371 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Ift88Q61371 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ift88Q61371 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ift88Q61371 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Ift88Q61371 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ift88Q61371 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ift88Q61371 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ift88Q61371 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ift88Q61371 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ift88Q61371 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ift88Q61371 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ift88Q61371 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Ift88Q61371 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ift88Q61371 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ift88Q61371 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ift88Q61371 Mir3081-201ENSMUST00000175305 84 ntBASIC17.03■□□□□ 0.32
Ift88Q61371 Gm44454-201ENSMUST00000198541 138 ntBASIC17.03■□□□□ 0.32
Ift88Q61371 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ift88Q61371 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ift88Q61371 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.03■□□□□ 0.32
Ift88Q61371 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ift88Q61371 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ift88Q61371 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ift88Q61371 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ift88Q61371 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ift88Q61371 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ift88Q61371 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ift88Q61371 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ift88Q61371 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Ift88Q61371 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ift88Q61371 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ift88Q61371 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ift88Q61371 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ift88Q61371 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ift88Q61371 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ift88Q61371 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ift88Q61371 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
Ift88Q61371 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ift88Q61371 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ift88Q61371 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Ift88Q61371 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ift88Q61371 Gm23634-201ENSMUST00000175071 91 ntBASIC17.02■□□□□ 0.32
Ift88Q61371 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ift88Q61371 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ift88Q61371 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.02■□□□□ 0.32
Ift88Q61371 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ift88Q61371 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ift88Q61371 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ift88Q61371 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ift88Q61371 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
Ift88Q61371 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
Ift88Q61371 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ift88Q61371 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ift88Q61371 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ift88Q61371 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ift88Q61371 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ift88Q61371 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ift88Q61371 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ift88Q61371 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ift88Q61371 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ift88Q61371 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.01■□□□□ 0.31
Ift88Q61371 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.01■□□□□ 0.31
Ift88Q61371 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.01■□□□□ 0.31
Ift88Q61371 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.01■□□□□ 0.31
Ift88Q61371 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ift88Q61371 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ift88Q61371 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ift88Q61371 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.01■□□□□ 0.31
Ift88Q61371 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.01■□□□□ 0.31
Ift88Q61371 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Ift88Q61371 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ift88Q61371 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ift88Q61371 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ift88Q61371 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ift88Q61371 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms