Protein–RNA interactions for Protein: Q61001

Lama5, Laminin subunit alpha-5, mousemouse

Predictions only

Length 3,718 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lama5Q61001 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lama5Q61001 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lama5Q61001 Gm15678-201ENSMUST00000117573 960 ntBASIC13.05□□□□□ -0.32
Lama5Q61001 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lama5Q61001 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lama5Q61001 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lama5Q61001 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.05□□□□□ -0.32
Lama5Q61001 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lama5Q61001 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lama5Q61001 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lama5Q61001 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Lama5Q61001 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lama5Q61001 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lama5Q61001 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lama5Q61001 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lama5Q61001 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lama5Q61001 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.05□□□□□ -0.32
Lama5Q61001 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Lama5Q61001 Gm43179-201ENSMUST00000198797 275 ntBASIC13.05□□□□□ -0.32
Lama5Q61001 Gm20445-201ENSMUST00000061905 565 ntBASIC13.05□□□□□ -0.32
Lama5Q61001 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.05□□□□□ -0.32
Lama5Q61001 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lama5Q61001 App-207ENSMUST00000227737 2827 ntBASIC13.05□□□□□ -0.32
Lama5Q61001 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lama5Q61001 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lama5Q61001 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lama5Q61001 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lama5Q61001 Gm13226-201ENSMUST00000117838 404 ntBASIC13.05□□□□□ -0.32
Lama5Q61001 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.05□□□□□ -0.32
Lama5Q61001 Gm8318-201ENSMUST00000182954 872 ntBASIC13.05□□□□□ -0.32
Lama5Q61001 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.05□□□□□ -0.32
Lama5Q61001 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lama5Q61001 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lama5Q61001 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.05□□□□□ -0.32
Lama5Q61001 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lama5Q61001 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.05□□□□□ -0.32
Lama5Q61001 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Lama5Q61001 Gm15806-201ENSMUST00000120696 955 ntBASIC13.04□□□□□ -0.32
Lama5Q61001 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lama5Q61001 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lama5Q61001 Gm9257-201ENSMUST00000221254 232 ntBASIC13.04□□□□□ -0.32
Lama5Q61001 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.04□□□□□ -0.32
Lama5Q61001 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lama5Q61001 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lama5Q61001 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Lama5Q61001 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lama5Q61001 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lama5Q61001 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lama5Q61001 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.04□□□□□ -0.32
Lama5Q61001 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lama5Q61001 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lama5Q61001 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lama5Q61001 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lama5Q61001 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lama5Q61001 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lama5Q61001 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lama5Q61001 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lama5Q61001 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lama5Q61001 Gm12957-201ENSMUST00000117835 377 ntBASIC13.04□□□□□ -0.32
Lama5Q61001 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.04□□□□□ -0.32
Lama5Q61001 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lama5Q61001 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lama5Q61001 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lama5Q61001 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lama5Q61001 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Lama5Q61001 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lama5Q61001 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.04□□□□□ -0.32
Lama5Q61001 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lama5Q61001 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Lama5Q61001 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lama5Q61001 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lama5Q61001 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lama5Q61001 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lama5Q61001 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.04□□□□□ -0.32
Lama5Q61001 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lama5Q61001 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.03□□□□□ -0.32
Lama5Q61001 Gm15198-201ENSMUST00000117283 177 ntBASIC13.03□□□□□ -0.32
Lama5Q61001 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lama5Q61001 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.03□□□□□ -0.32
Lama5Q61001 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lama5Q61001 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lama5Q61001 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lama5Q61001 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lama5Q61001 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.03□□□□□ -0.32
Lama5Q61001 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lama5Q61001 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.03□□□□□ -0.32
Lama5Q61001 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lama5Q61001 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lama5Q61001 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.03□□□□□ -0.32
Lama5Q61001 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.03□□□□□ -0.32
Lama5Q61001 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lama5Q61001 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.03□□□□□ -0.32
Lama5Q61001 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Lama5Q61001 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Lama5Q61001 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lama5Q61001 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lama5Q61001 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lama5Q61001 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lama5Q61001 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lama5Q61001 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms