Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Satb1Q60611 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Satb1Q60611 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Satb1Q60611 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Satb1Q60611 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Satb1Q60611 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Satb1Q60611 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Satb1Q60611 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.9■□□□□ 0.14
Satb1Q60611 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.9■□□□□ 0.14
Satb1Q60611 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Satb1Q60611 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Satb1Q60611 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Satb1Q60611 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Satb1Q60611 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Satb1Q60611 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Satb1Q60611 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Satb1Q60611 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Satb1Q60611 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Satb1Q60611 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Satb1Q60611 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Satb1Q60611 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Satb1Q60611 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Satb1Q60611 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
Satb1Q60611 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Satb1Q60611 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Satb1Q60611 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Satb1Q60611 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Satb1Q60611 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
Satb1Q60611 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Satb1Q60611 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.89■□□□□ 0.13
Satb1Q60611 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Satb1Q60611 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Satb1Q60611 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Satb1Q60611 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Satb1Q60611 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Satb1Q60611 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Satb1Q60611 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Satb1Q60611 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.89■□□□□ 0.13
Satb1Q60611 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Satb1Q60611 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Satb1Q60611 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Satb1Q60611 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Satb1Q60611 Gm22175-201ENSMUST00000175007 78 ntBASIC15.89■□□□□ 0.13
Satb1Q60611 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.89■□□□□ 0.13
Satb1Q60611 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.89■□□□□ 0.13
Satb1Q60611 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC15.89■□□□□ 0.13
Satb1Q60611 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Satb1Q60611 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Satb1Q60611 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Satb1Q60611 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Satb1Q60611 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Satb1Q60611 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Satb1Q60611 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Satb1Q60611 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.89■□□□□ 0.13
Satb1Q60611 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Satb1Q60611 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Satb1Q60611 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Satb1Q60611 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Satb1Q60611 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Satb1Q60611 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Satb1Q60611 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Satb1Q60611 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Satb1Q60611 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.89■□□□□ 0.13
Satb1Q60611 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Satb1Q60611 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.89■□□□□ 0.13
Satb1Q60611 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Satb1Q60611 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Satb1Q60611 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Satb1Q60611 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Satb1Q60611 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Satb1Q60611 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Satb1Q60611 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Satb1Q60611 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Satb1Q60611 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
Satb1Q60611 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Satb1Q60611 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Satb1Q60611 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC15.88■□□□□ 0.13
Satb1Q60611 H2-Pa-201ENSMUST00000182803 626 ntBASIC15.88■□□□□ 0.13
Satb1Q60611 Gm17968-201ENSMUST00000194902 784 ntBASIC15.88■□□□□ 0.13
Satb1Q60611 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.88■□□□□ 0.13
Satb1Q60611 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.88■□□□□ 0.13
Satb1Q60611 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC15.88■□□□□ 0.13
Satb1Q60611 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Satb1Q60611 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Satb1Q60611 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Satb1Q60611 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Satb1Q60611 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Satb1Q60611 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.88■□□□□ 0.13
Satb1Q60611 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Satb1Q60611 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Satb1Q60611 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Satb1Q60611 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Satb1Q60611 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Satb1Q60611 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Satb1Q60611 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.87■□□□□ 0.13
Satb1Q60611 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Satb1Q60611 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Satb1Q60611 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Satb1Q60611 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.87■□□□□ 0.13
Satb1Q60611 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms