Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav6-2Q5R1I4 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-2Q5R1I4 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-2Q5R1I4 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-2Q5R1I4 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-2Q5R1I4 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-2Q5R1I4 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-2Q5R1I4 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav6-2Q5R1I4 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-2Q5R1I4 Gm9385-201ENSMUST00000117563 472 ntBASIC13.47□□□□□ -0.25
Trav6-2Q5R1I4 Gm16198-201ENSMUST00000118766 670 ntBASIC13.47□□□□□ -0.25
Trav6-2Q5R1I4 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-2Q5R1I4 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-2Q5R1I4 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav6-2Q5R1I4 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.47□□□□□ -0.25
Trav6-2Q5R1I4 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-2Q5R1I4 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-2Q5R1I4 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav6-2Q5R1I4 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-2Q5R1I4 Gm20553-201ENSMUST00000204205 844 ntBASIC13.47□□□□□ -0.25
Trav6-2Q5R1I4 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.47□□□□□ -0.25
Trav6-2Q5R1I4 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav6-2Q5R1I4 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.47□□□□□ -0.25
Trav6-2Q5R1I4 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.47□□□□□ -0.25
Trav6-2Q5R1I4 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.47□□□□□ -0.25
Trav6-2Q5R1I4 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trav6-2Q5R1I4 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.47□□□□□ -0.25
Trav6-2Q5R1I4 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-2Q5R1I4 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-2Q5R1I4 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-2Q5R1I4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-2Q5R1I4 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav6-2Q5R1I4 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-2Q5R1I4 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-2Q5R1I4 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-2Q5R1I4 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-2Q5R1I4 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-2Q5R1I4 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-2Q5R1I4 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trav6-2Q5R1I4 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-2Q5R1I4 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-2Q5R1I4 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-2Q5R1I4 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-2Q5R1I4 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-2Q5R1I4 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.46□□□□□ -0.25
Trav6-2Q5R1I4 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-2Q5R1I4 Gm43474-201ENSMUST00000196415 774 ntBASIC13.46□□□□□ -0.25
Trav6-2Q5R1I4 Gm43125-201ENSMUST00000201724 730 ntBASIC13.46□□□□□ -0.25
Trav6-2Q5R1I4 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.46□□□□□ -0.25
Trav6-2Q5R1I4 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trav6-2Q5R1I4 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trav6-2Q5R1I4 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-2Q5R1I4 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-2Q5R1I4 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-2Q5R1I4 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-2Q5R1I4 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-2Q5R1I4 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-2Q5R1I4 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav6-2Q5R1I4 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6-2Q5R1I4 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6-2Q5R1I4 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.26
Trav6-2Q5R1I4 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.46□□□□□ -0.26
Trav6-2Q5R1I4 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.46□□□□□ -0.26
Trav6-2Q5R1I4 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav6-2Q5R1I4 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Trav6-2Q5R1I4 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Trav6-2Q5R1I4 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-2Q5R1I4 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-2Q5R1I4 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Trav6-2Q5R1I4 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-2Q5R1I4 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-2Q5R1I4 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.45□□□□□ -0.26
Trav6-2Q5R1I4 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.45□□□□□ -0.26
Trav6-2Q5R1I4 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.45□□□□□ -0.26
Trav6-2Q5R1I4 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-2Q5R1I4 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.45□□□□□ -0.26
Trav6-2Q5R1I4 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-2Q5R1I4 AA543401-201ENSMUST00000164248 1269 ntBASIC13.45□□□□□ -0.26
Trav6-2Q5R1I4 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.45□□□□□ -0.26
Trav6-2Q5R1I4 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav6-2Q5R1I4 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav6-2Q5R1I4 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Trav6-2Q5R1I4 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav6-2Q5R1I4 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms