Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC11.99□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC11.99□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 CT009713.7-201ENSMUST00000224689 571 ntBASIC11.99□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 AC114585.2-202ENSMUST00000228094 426 ntBASIC11.99□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Gm7367-201ENSMUST00000057611 492 ntBASIC11.99□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Gm5049-201ENSMUST00000195878 1590 ntBASIC11.99□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Gm12134-201ENSMUST00000122109 520 ntBASIC11.98□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC11.98□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC11.98□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 AC127302.2-201ENSMUST00000215212 268 ntBASIC11.98□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav15-1-dv6-1Q5R1D2 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms