Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8d-2Q5R1B6 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8d-2Q5R1B6 Gm14719-201ENSMUST00000121891 340 ntBASIC14.92□□□□□ -0.02
Trav8d-2Q5R1B6 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Trav8d-2Q5R1B6 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8d-2Q5R1B6 Gm29541-201ENSMUST00000191351 678 ntBASIC14.92□□□□□ -0.02
Trav8d-2Q5R1B6 Gm44855-201ENSMUST00000205725 362 ntBASIC14.92□□□□□ -0.02
Trav8d-2Q5R1B6 Gm7653-201ENSMUST00000214567 508 ntBASIC14.92□□□□□ -0.02
Trav8d-2Q5R1B6 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8d-2Q5R1B6 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8d-2Q5R1B6 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav8d-2Q5R1B6 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8d-2Q5R1B6 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8d-2Q5R1B6 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8d-2Q5R1B6 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8d-2Q5R1B6 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8d-2Q5R1B6 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8d-2Q5R1B6 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav8d-2Q5R1B6 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav8d-2Q5R1B6 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8d-2Q5R1B6 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8d-2Q5R1B6 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8d-2Q5R1B6 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8d-2Q5R1B6 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trav8d-2Q5R1B6 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.91□□□□□ -0.02
Trav8d-2Q5R1B6 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.91□□□□□ -0.02
Trav8d-2Q5R1B6 Gm15483-201ENSMUST00000120338 456 ntBASIC14.91□□□□□ -0.02
Trav8d-2Q5R1B6 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8d-2Q5R1B6 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8d-2Q5R1B6 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8d-2Q5R1B6 Gm9063-201ENSMUST00000223299 582 ntBASIC14.91□□□□□ -0.02
Trav8d-2Q5R1B6 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8d-2Q5R1B6 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8d-2Q5R1B6 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8d-2Q5R1B6 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8d-2Q5R1B6 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8d-2Q5R1B6 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8d-2Q5R1B6 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.91□□□□□ -0.02
Trav8d-2Q5R1B6 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.91□□□□□ -0.02
Trav8d-2Q5R1B6 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8d-2Q5R1B6 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.9□□□□□ -0.02
Trav8d-2Q5R1B6 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8d-2Q5R1B6 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8d-2Q5R1B6 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8d-2Q5R1B6 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8d-2Q5R1B6 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav8d-2Q5R1B6 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Trav8d-2Q5R1B6 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav8d-2Q5R1B6 Gm13015-201ENSMUST00000118674 204 ntBASIC14.9□□□□□ -0.02
Trav8d-2Q5R1B6 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8d-2Q5R1B6 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav8d-2Q5R1B6 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8d-2Q5R1B6 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8d-2Q5R1B6 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8d-2Q5R1B6 Gm27838-201ENSMUST00000184829 128 ntBASIC14.9□□□□□ -0.02
Trav8d-2Q5R1B6 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8d-2Q5R1B6 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.9□□□□□ -0.02
Trav8d-2Q5R1B6 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.9□□□□□ -0.02
Trav8d-2Q5R1B6 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8d-2Q5R1B6 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav8d-2Q5R1B6 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8d-2Q5R1B6 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav8d-2Q5R1B6 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav8d-2Q5R1B6 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8d-2Q5R1B6 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Trav8d-2Q5R1B6 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8d-2Q5R1B6 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav8d-2Q5R1B6 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8d-2Q5R1B6 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav8d-2Q5R1B6 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8d-2Q5R1B6 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav8d-2Q5R1B6 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8d-2Q5R1B6 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav8d-2Q5R1B6 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trav8d-2Q5R1B6 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8d-2Q5R1B6 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8d-2Q5R1B6 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
Trav8d-2Q5R1B6 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8d-2Q5R1B6 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8d-2Q5R1B6 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8d-2Q5R1B6 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav8d-2Q5R1B6 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav8d-2Q5R1B6 Gm15487-201ENSMUST00000122373 465 ntBASIC14.89□□□□□ -0.03
Trav8d-2Q5R1B6 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.89□□□□□ -0.03
Trav8d-2Q5R1B6 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8d-2Q5R1B6 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav8d-2Q5R1B6 Gm27920-201ENSMUST00000183953 96 ntBASIC14.89□□□□□ -0.03
Trav8d-2Q5R1B6 Gm9794-201ENSMUST00000202370 423 ntBASIC14.89□□□□□ -0.03
Trav8d-2Q5R1B6 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.89□□□□□ -0.03
Trav8d-2Q5R1B6 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Trav8d-2Q5R1B6 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8d-2Q5R1B6 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.89□□□□□ -0.03
Trav8d-2Q5R1B6 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8d-2Q5R1B6 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav8d-2Q5R1B6 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8d-2Q5R1B6 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8d-2Q5R1B6 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.89□□□□□ -0.03
Trav8d-2Q5R1B6 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8d-2Q5R1B6 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8d-2Q5R1B6 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms