Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Trim41Q5NCC3 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Trim41Q5NCC3 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Trim41Q5NCC3 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
Trim41Q5NCC3 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Trim41Q5NCC3 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Trim41Q5NCC3 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Trim41Q5NCC3 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Trim41Q5NCC3 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
Trim41Q5NCC3 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Trim41Q5NCC3 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC26.56■■□□□ 1.84
Trim41Q5NCC3 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC26.56■■□□□ 1.84
Trim41Q5NCC3 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC26.56■■□□□ 1.84
Trim41Q5NCC3 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC26.56■■□□□ 1.84
Trim41Q5NCC3 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Trim41Q5NCC3 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Trim41Q5NCC3 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
Trim41Q5NCC3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC26.56■■□□□ 1.84
Trim41Q5NCC3 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Trim41Q5NCC3 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Trim41Q5NCC3 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Trim41Q5NCC3 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
Trim41Q5NCC3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Trim41Q5NCC3 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC26.55■■□□□ 1.84
Trim41Q5NCC3 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
Trim41Q5NCC3 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC26.55■■□□□ 1.84
Trim41Q5NCC3 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Trim41Q5NCC3 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Trim41Q5NCC3 Rprl2-201ENSMUST00000157150 290 ntBASIC26.55■■□□□ 1.84
Trim41Q5NCC3 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Trim41Q5NCC3 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Trim41Q5NCC3 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
Trim41Q5NCC3 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC26.55■■□□□ 1.84
Trim41Q5NCC3 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC26.55■■□□□ 1.84
Trim41Q5NCC3 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
Trim41Q5NCC3 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
Trim41Q5NCC3 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Trim41Q5NCC3 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
Trim41Q5NCC3 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Trim41Q5NCC3 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
Trim41Q5NCC3 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Trim41Q5NCC3 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Trim41Q5NCC3 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Trim41Q5NCC3 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Trim41Q5NCC3 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Trim41Q5NCC3 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Trim41Q5NCC3 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Trim41Q5NCC3 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC26.55■■□□□ 1.84
Trim41Q5NCC3 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Trim41Q5NCC3 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Trim41Q5NCC3 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Trim41Q5NCC3 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Trim41Q5NCC3 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Trim41Q5NCC3 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Trim41Q5NCC3 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Trim41Q5NCC3 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Trim41Q5NCC3 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Trim41Q5NCC3 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
Trim41Q5NCC3 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC26.54■■□□□ 1.84
Trim41Q5NCC3 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Trim41Q5NCC3 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC26.54■■□□□ 1.84
Trim41Q5NCC3 Mir3102-201ENSMUST00000175555 104 ntBASIC26.54■■□□□ 1.84
Trim41Q5NCC3 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Trim41Q5NCC3 AC153962.4-201ENSMUST00000217878 242 ntBASIC26.54■■□□□ 1.84
Trim41Q5NCC3 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Trim41Q5NCC3 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Trim41Q5NCC3 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Trim41Q5NCC3 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Trim41Q5NCC3 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Trim41Q5NCC3 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Trim41Q5NCC3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Trim41Q5NCC3 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Trim41Q5NCC3 Gm7488-201ENSMUST00000117148 684 ntBASIC26.53■■□□□ 1.84
Trim41Q5NCC3 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC26.53■■□□□ 1.84
Trim41Q5NCC3 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC26.53■■□□□ 1.84
Trim41Q5NCC3 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC26.53■■□□□ 1.84
Trim41Q5NCC3 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC26.53■■□□□ 1.84
Trim41Q5NCC3 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC26.53■■□□□ 1.84
Trim41Q5NCC3 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Trim41Q5NCC3 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Trim41Q5NCC3 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Trim41Q5NCC3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
Trim41Q5NCC3 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Trim41Q5NCC3 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC26.52■■□□□ 1.84
Trim41Q5NCC3 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Trim41Q5NCC3 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Trim41Q5NCC3 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Trim41Q5NCC3 Gm13223-201ENSMUST00000118609 747 ntBASIC26.52■■□□□ 1.84
Trim41Q5NCC3 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Trim41Q5NCC3 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC26.52■■□□□ 1.84
Trim41Q5NCC3 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Trim41Q5NCC3 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC26.52■■□□□ 1.84
Trim41Q5NCC3 Gm26917-202ENSMUST00000192833 3329 ntBASIC26.52■■□□□ 1.84
Trim41Q5NCC3 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Trim41Q5NCC3 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Trim41Q5NCC3 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Trim41Q5NCC3 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Trim41Q5NCC3 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Trim41Q5NCC3 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC26.52■■□□□ 1.84
Trim41Q5NCC3 Shroom3-211ENSMUST00000225438 5742 ntBASIC26.52■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms