Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.23■□□□□ 0.03
Scn2bQ56A07 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.23■□□□□ 0.03
Scn2bQ56A07 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn2bQ56A07 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn2bQ56A07 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn2bQ56A07 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Scn2bQ56A07 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn2bQ56A07 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn2bQ56A07 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn2bQ56A07 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Scn2bQ56A07 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.23■□□□□ 0.03
Scn2bQ56A07 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Scn2bQ56A07 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.23■□□□□ 0.03
Scn2bQ56A07 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn2bQ56A07 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn2bQ56A07 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn2bQ56A07 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn2bQ56A07 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn2bQ56A07 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Scn2bQ56A07 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Scn2bQ56A07 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.22■□□□□ 0.03
Scn2bQ56A07 Gm28033-201ENSMUST00000184224 96 ntBASIC15.22■□□□□ 0.03
Scn2bQ56A07 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.22■□□□□ 0.03
Scn2bQ56A07 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.22■□□□□ 0.03
Scn2bQ56A07 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.22■□□□□ 0.03
Scn2bQ56A07 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn2bQ56A07 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Scn2bQ56A07 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn2bQ56A07 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn2bQ56A07 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn2bQ56A07 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Scn2bQ56A07 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn2bQ56A07 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn2bQ56A07 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn2bQ56A07 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn2bQ56A07 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Scn2bQ56A07 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Scn2bQ56A07 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Scn2bQ56A07 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.22■□□□□ 0.03
Scn2bQ56A07 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Scn2bQ56A07 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn2bQ56A07 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn2bQ56A07 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn2bQ56A07 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn2bQ56A07 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.21■□□□□ 0.03
Scn2bQ56A07 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scn2bQ56A07 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scn2bQ56A07 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn2bQ56A07 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.21■□□□□ 0.03
Scn2bQ56A07 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn2bQ56A07 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn2bQ56A07 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scn2bQ56A07 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scn2bQ56A07 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn2bQ56A07 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.21■□□□□ 0.03
Scn2bQ56A07 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.21■□□□□ 0.03
Scn2bQ56A07 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.21■□□□□ 0.03
Scn2bQ56A07 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn2bQ56A07 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scn2bQ56A07 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Scn2bQ56A07 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Scn2bQ56A07 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn2bQ56A07 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn2bQ56A07 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn2bQ56A07 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Scn2bQ56A07 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Scn2bQ56A07 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Scn2bQ56A07 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Scn2bQ56A07 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Scn2bQ56A07 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Scn2bQ56A07 Efs-202ENSMUST00000227037 2540 ntBASIC15.2■□□□□ 0.02
Scn2bQ56A07 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Scn2bQ56A07 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn2bQ56A07 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn2bQ56A07 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn2bQ56A07 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn2bQ56A07 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Scn2bQ56A07 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn2bQ56A07 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn2bQ56A07 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn2bQ56A07 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn2bQ56A07 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn2bQ56A07 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.2■□□□□ 0.02
Scn2bQ56A07 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scn2bQ56A07 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.2■□□□□ 0.02
Scn2bQ56A07 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.2■□□□□ 0.02
Scn2bQ56A07 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.2■□□□□ 0.02
Scn2bQ56A07 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Scn2bQ56A07 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn2bQ56A07 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scn2bQ56A07 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn2bQ56A07 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn2bQ56A07 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn2bQ56A07 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn2bQ56A07 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn2bQ56A07 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn2bQ56A07 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scn2bQ56A07 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn2bQ56A07 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn2bQ56A07 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms