Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rc3h1Q4VGL6 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Rc3h1Q4VGL6 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.73■□□□□ 0.43
Rc3h1Q4VGL6 Gm15427-201ENSMUST00000117288 531 ntBASIC17.73■□□□□ 0.43
Rc3h1Q4VGL6 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.73■□□□□ 0.43
Rc3h1Q4VGL6 Gm12008-201ENSMUST00000117791 755 ntBASIC17.73■□□□□ 0.43
Rc3h1Q4VGL6 Gm16198-201ENSMUST00000118766 670 ntBASIC17.73■□□□□ 0.43
Rc3h1Q4VGL6 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.73■□□□□ 0.43
Rc3h1Q4VGL6 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.73■□□□□ 0.43
Rc3h1Q4VGL6 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.73■□□□□ 0.43
Rc3h1Q4VGL6 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.73■□□□□ 0.43
Rc3h1Q4VGL6 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Rc3h1Q4VGL6 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.73■□□□□ 0.43
Rc3h1Q4VGL6 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rc3h1Q4VGL6 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rc3h1Q4VGL6 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rc3h1Q4VGL6 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rc3h1Q4VGL6 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rc3h1Q4VGL6 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.73■□□□□ 0.43
Rc3h1Q4VGL6 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Rc3h1Q4VGL6 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rc3h1Q4VGL6 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.72■□□□□ 0.43
Rc3h1Q4VGL6 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Rc3h1Q4VGL6 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Rc3h1Q4VGL6 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rc3h1Q4VGL6 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Rc3h1Q4VGL6 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Rc3h1Q4VGL6 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rc3h1Q4VGL6 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rc3h1Q4VGL6 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rc3h1Q4VGL6 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rc3h1Q4VGL6 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rc3h1Q4VGL6 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rc3h1Q4VGL6 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rc3h1Q4VGL6 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.72■□□□□ 0.43
Rc3h1Q4VGL6 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.72■□□□□ 0.43
Rc3h1Q4VGL6 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rc3h1Q4VGL6 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rc3h1Q4VGL6 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rc3h1Q4VGL6 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Rc3h1Q4VGL6 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rc3h1Q4VGL6 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Rc3h1Q4VGL6 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rc3h1Q4VGL6 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rc3h1Q4VGL6 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rc3h1Q4VGL6 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rc3h1Q4VGL6 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rc3h1Q4VGL6 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rc3h1Q4VGL6 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rc3h1Q4VGL6 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Rc3h1Q4VGL6 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rc3h1Q4VGL6 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Rc3h1Q4VGL6 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.71■□□□□ 0.43
Rc3h1Q4VGL6 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rc3h1Q4VGL6 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rc3h1Q4VGL6 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.71■□□□□ 0.43
Rc3h1Q4VGL6 Gm26308-201ENSMUST00000157768 69 ntBASIC17.71■□□□□ 0.43
Rc3h1Q4VGL6 Gm25925-201ENSMUST00000158314 306 ntBASIC17.71■□□□□ 0.43
Rc3h1Q4VGL6 Gm27301-201ENSMUST00000184012 127 ntBASIC17.71■□□□□ 0.43
Rc3h1Q4VGL6 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rc3h1Q4VGL6 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rc3h1Q4VGL6 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rc3h1Q4VGL6 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rc3h1Q4VGL6 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Rc3h1Q4VGL6 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.71■□□□□ 0.42
Rc3h1Q4VGL6 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rc3h1Q4VGL6 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rc3h1Q4VGL6 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.7■□□□□ 0.42
Rc3h1Q4VGL6 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rc3h1Q4VGL6 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rc3h1Q4VGL6 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rc3h1Q4VGL6 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rc3h1Q4VGL6 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Rc3h1Q4VGL6 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rc3h1Q4VGL6 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rc3h1Q4VGL6 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rc3h1Q4VGL6 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Rc3h1Q4VGL6 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rc3h1Q4VGL6 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.7■□□□□ 0.42
Rc3h1Q4VGL6 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rc3h1Q4VGL6 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rc3h1Q4VGL6 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.7■□□□□ 0.42
Rc3h1Q4VGL6 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rc3h1Q4VGL6 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rc3h1Q4VGL6 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rc3h1Q4VGL6 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Rc3h1Q4VGL6 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rc3h1Q4VGL6 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rc3h1Q4VGL6 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Rc3h1Q4VGL6 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rc3h1Q4VGL6 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rc3h1Q4VGL6 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rc3h1Q4VGL6 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Rc3h1Q4VGL6 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rc3h1Q4VGL6 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rc3h1Q4VGL6 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rc3h1Q4VGL6 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Rc3h1Q4VGL6 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rc3h1Q4VGL6 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rc3h1Q4VGL6 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms