Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.92■□□□□ 0.46
Prpf38aQ4FK66 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf38aQ4FK66 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf38aQ4FK66 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf38aQ4FK66 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf38aQ4FK66 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf38aQ4FK66 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Prpf38aQ4FK66 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf38aQ4FK66 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf38aQ4FK66 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf38aQ4FK66 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Prpf38aQ4FK66 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf38aQ4FK66 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Prpf38aQ4FK66 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Prpf38aQ4FK66 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf38aQ4FK66 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.91■□□□□ 0.46
Prpf38aQ4FK66 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Prpf38aQ4FK66 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf38aQ4FK66 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf38aQ4FK66 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf38aQ4FK66 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.91■□□□□ 0.46
Prpf38aQ4FK66 Gm2272-201ENSMUST00000194903 582 ntBASIC17.91■□□□□ 0.46
Prpf38aQ4FK66 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf38aQ4FK66 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Prpf38aQ4FK66 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf38aQ4FK66 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prpf38aQ4FK66 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf38aQ4FK66 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Prpf38aQ4FK66 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf38aQ4FK66 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
Prpf38aQ4FK66 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.9■□□□□ 0.46
Prpf38aQ4FK66 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf38aQ4FK66 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf38aQ4FK66 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.9■□□□□ 0.46
Prpf38aQ4FK66 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.9■□□□□ 0.46
Prpf38aQ4FK66 Gm25925-201ENSMUST00000158314 306 ntBASIC17.9■□□□□ 0.46
Prpf38aQ4FK66 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.9■□□□□ 0.46
Prpf38aQ4FK66 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.9■□□□□ 0.46
Prpf38aQ4FK66 Gm45612-201ENSMUST00000211320 160 ntBASIC17.9■□□□□ 0.46
Prpf38aQ4FK66 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf38aQ4FK66 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.9■□□□□ 0.46
Prpf38aQ4FK66 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf38aQ4FK66 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Prpf38aQ4FK66 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf38aQ4FK66 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf38aQ4FK66 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf38aQ4FK66 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf38aQ4FK66 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf38aQ4FK66 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Prpf38aQ4FK66 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf38aQ4FK66 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf38aQ4FK66 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prpf38aQ4FK66 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Prpf38aQ4FK66 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf38aQ4FK66 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf38aQ4FK66 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf38aQ4FK66 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf38aQ4FK66 Gm27494-201ENSMUST00000184735 189 ntBASIC17.89■□□□□ 0.45
Prpf38aQ4FK66 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.89■□□□□ 0.45
Prpf38aQ4FK66 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf38aQ4FK66 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf38aQ4FK66 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf38aQ4FK66 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Prpf38aQ4FK66 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf38aQ4FK66 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.89■□□□□ 0.45
Prpf38aQ4FK66 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf38aQ4FK66 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prpf38aQ4FK66 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Prpf38aQ4FK66 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.88■□□□□ 0.45
Prpf38aQ4FK66 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf38aQ4FK66 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
Prpf38aQ4FK66 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf38aQ4FK66 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf38aQ4FK66 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf38aQ4FK66 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Prpf38aQ4FK66 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf38aQ4FK66 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf38aQ4FK66 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf38aQ4FK66 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf38aQ4FK66 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf38aQ4FK66 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf38aQ4FK66 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf38aQ4FK66 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf38aQ4FK66 Gm16198-201ENSMUST00000118766 670 ntBASIC17.88■□□□□ 0.45
Prpf38aQ4FK66 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Prpf38aQ4FK66 Mir1895-201ENSMUST00000122615 79 ntBASIC17.88■□□□□ 0.45
Prpf38aQ4FK66 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.88■□□□□ 0.45
Prpf38aQ4FK66 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Prpf38aQ4FK66 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf38aQ4FK66 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf38aQ4FK66 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Prpf38aQ4FK66 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf38aQ4FK66 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
Prpf38aQ4FK66 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf38aQ4FK66 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf38aQ4FK66 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Prpf38aQ4FK66 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf38aQ4FK66 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf38aQ4FK66 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prpf38aQ4FK66 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms