Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim43aQ3TL54 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.34■□□□□ 0.21
Trim43aQ3TL54 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim43aQ3TL54 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim43aQ3TL54 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim43aQ3TL54 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.34■□□□□ 0.21
Trim43aQ3TL54 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim43aQ3TL54 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.34■□□□□ 0.21
Trim43aQ3TL54 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.34■□□□□ 0.21
Trim43aQ3TL54 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim43aQ3TL54 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim43aQ3TL54 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trim43aQ3TL54 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim43aQ3TL54 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim43aQ3TL54 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim43aQ3TL54 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trim43aQ3TL54 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim43aQ3TL54 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Trim43aQ3TL54 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim43aQ3TL54 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim43aQ3TL54 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim43aQ3TL54 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim43aQ3TL54 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim43aQ3TL54 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim43aQ3TL54 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.33■□□□□ 0.21
Trim43aQ3TL54 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim43aQ3TL54 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim43aQ3TL54 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Trim43aQ3TL54 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim43aQ3TL54 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim43aQ3TL54 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim43aQ3TL54 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Trim43aQ3TL54 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.33■□□□□ 0.2
Trim43aQ3TL54 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim43aQ3TL54 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trim43aQ3TL54 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.33■□□□□ 0.2
Trim43aQ3TL54 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.33■□□□□ 0.2
Trim43aQ3TL54 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.33■□□□□ 0.2
Trim43aQ3TL54 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Trim43aQ3TL54 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim43aQ3TL54 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim43aQ3TL54 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim43aQ3TL54 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim43aQ3TL54 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim43aQ3TL54 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim43aQ3TL54 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim43aQ3TL54 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim43aQ3TL54 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim43aQ3TL54 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim43aQ3TL54 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim43aQ3TL54 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.32■□□□□ 0.2
Trim43aQ3TL54 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43aQ3TL54 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43aQ3TL54 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43aQ3TL54 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43aQ3TL54 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Trim43aQ3TL54 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43aQ3TL54 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.32■□□□□ 0.2
Trim43aQ3TL54 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43aQ3TL54 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43aQ3TL54 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43aQ3TL54 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43aQ3TL54 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43aQ3TL54 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43aQ3TL54 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trim43aQ3TL54 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Trim43aQ3TL54 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Trim43aQ3TL54 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43aQ3TL54 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43aQ3TL54 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trim43aQ3TL54 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.32■□□□□ 0.2
Trim43aQ3TL54 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim43aQ3TL54 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43aQ3TL54 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43aQ3TL54 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43aQ3TL54 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43aQ3TL54 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43aQ3TL54 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43aQ3TL54 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43aQ3TL54 Mir770-201ENSMUST00000103252 94 ntBASIC16.31■□□□□ 0.2
Trim43aQ3TL54 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43aQ3TL54 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.31■□□□□ 0.2
Trim43aQ3TL54 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43aQ3TL54 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trim43aQ3TL54 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43aQ3TL54 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43aQ3TL54 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trim43aQ3TL54 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43aQ3TL54 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.31■□□□□ 0.2
Trim43aQ3TL54 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43aQ3TL54 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43aQ3TL54 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim43aQ3TL54 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.31■□□□□ 0.2
Trim43aQ3TL54 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43aQ3TL54 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43aQ3TL54 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trim43aQ3TL54 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43aQ3TL54 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim43aQ3TL54 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trim43aQ3TL54 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms