Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim63Q38HM4 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim63Q38HM4 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim63Q38HM4 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Trim63Q38HM4 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim63Q38HM4 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim63Q38HM4 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim63Q38HM4 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim63Q38HM4 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim63Q38HM4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC12.73□□□□□ -0.37
Trim63Q38HM4 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC12.73□□□□□ -0.37
Trim63Q38HM4 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim63Q38HM4 Flvcr1-202ENSMUST00000191946 1216 ntBASIC12.73□□□□□ -0.37
Trim63Q38HM4 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim63Q38HM4 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim63Q38HM4 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim63Q38HM4 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim63Q38HM4 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim63Q38HM4 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim63Q38HM4 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim63Q38HM4 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim63Q38HM4 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim63Q38HM4 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim63Q38HM4 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim63Q38HM4 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim63Q38HM4 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim63Q38HM4 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.72□□□□□ -0.37
Trim63Q38HM4 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim63Q38HM4 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim63Q38HM4 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim63Q38HM4 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim63Q38HM4 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim63Q38HM4 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trim63Q38HM4 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim63Q38HM4 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim63Q38HM4 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC12.72□□□□□ -0.37
Trim63Q38HM4 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim63Q38HM4 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trim63Q38HM4 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim63Q38HM4 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim63Q38HM4 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim63Q38HM4 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim63Q38HM4 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim63Q38HM4 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim63Q38HM4 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim63Q38HM4 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim63Q38HM4 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim63Q38HM4 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim63Q38HM4 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim63Q38HM4 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Trim63Q38HM4 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim63Q38HM4 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trim63Q38HM4 AC093043.1-201ENSMUST00000226700 898 ntBASIC12.72□□□□□ -0.37
Trim63Q38HM4 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trim63Q38HM4 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim63Q38HM4 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim63Q38HM4 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim63Q38HM4 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim63Q38HM4 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim63Q38HM4 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Trim63Q38HM4 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trim63Q38HM4 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim63Q38HM4 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim63Q38HM4 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim63Q38HM4 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim63Q38HM4 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
Trim63Q38HM4 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim63Q38HM4 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim63Q38HM4 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim63Q38HM4 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim63Q38HM4 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim63Q38HM4 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim63Q38HM4 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trim63Q38HM4 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trim63Q38HM4 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim63Q38HM4 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim63Q38HM4 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim63Q38HM4 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim63Q38HM4 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim63Q38HM4 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim63Q38HM4 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim63Q38HM4 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC12.71□□□□□ -0.37
Trim63Q38HM4 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim63Q38HM4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim63Q38HM4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim63Q38HM4 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trim63Q38HM4 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Trim63Q38HM4 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim63Q38HM4 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim63Q38HM4 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim63Q38HM4 AC131586.2-201ENSMUST00000228370 1512 ntBASIC12.71□□□□□ -0.38
Trim63Q38HM4 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim63Q38HM4 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Trim63Q38HM4 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim63Q38HM4 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim63Q38HM4 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim63Q38HM4 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trim63Q38HM4 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim63Q38HM4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trim63Q38HM4 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms