Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Gm18766-201ENSMUST00000189811 808 ntBASIC18.21■□□□□ 0.51
Chrna5Q2MKA5 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC18.21■□□□□ 0.51
Chrna5Q2MKA5 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chrna5Q2MKA5 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Chrna5Q2MKA5 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Chrna5Q2MKA5 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chrna5Q2MKA5 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Chrna5Q2MKA5 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Chrna5Q2MKA5 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Chrna5Q2MKA5 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Chrna5Q2MKA5 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Chrna5Q2MKA5 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chrna5Q2MKA5 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC18.2■□□□□ 0.5
Chrna5Q2MKA5 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chrna5Q2MKA5 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Chrna5Q2MKA5 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Chrna5Q2MKA5 Gm16215-201ENSMUST00000161990 637 ntBASIC18.2■□□□□ 0.5
Chrna5Q2MKA5 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chrna5Q2MKA5 Gm8116-201ENSMUST00000182917 1201 ntBASIC18.2■□□□□ 0.5
Chrna5Q2MKA5 Gm44855-201ENSMUST00000205725 362 ntBASIC18.2■□□□□ 0.5
Chrna5Q2MKA5 Gm7730-201ENSMUST00000212486 454 ntBASIC18.2■□□□□ 0.5
Chrna5Q2MKA5 Gm9063-201ENSMUST00000223299 582 ntBASIC18.2■□□□□ 0.5
Chrna5Q2MKA5 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chrna5Q2MKA5 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Chrna5Q2MKA5 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Chrna5Q2MKA5 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chrna5Q2MKA5 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chrna5Q2MKA5 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chrna5Q2MKA5 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Chrna5Q2MKA5 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chrna5Q2MKA5 Gm42934-201ENSMUST00000196920 1345 ntBASIC18.2■□□□□ 0.5
Chrna5Q2MKA5 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chrna5Q2MKA5 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Chrna5Q2MKA5 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chrna5Q2MKA5 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chrna5Q2MKA5 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC18.19■□□□□ 0.5
Chrna5Q2MKA5 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chrna5Q2MKA5 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Chrna5Q2MKA5 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Chrna5Q2MKA5 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chrna5Q2MKA5 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.19■□□□□ 0.5
Chrna5Q2MKA5 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Chrna5Q2MKA5 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chrna5Q2MKA5 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Chrna5Q2MKA5 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Chrna5Q2MKA5 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Chrna5Q2MKA5 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC18.19■□□□□ 0.5
Chrna5Q2MKA5 Gm18737-201ENSMUST00000173594 937 ntBASIC18.19■□□□□ 0.5
Chrna5Q2MKA5 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC18.19■□□□□ 0.5
Chrna5Q2MKA5 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Chrna5Q2MKA5 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC18.19■□□□□ 0.5
Chrna5Q2MKA5 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chrna5Q2MKA5 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chrna5Q2MKA5 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Chrna5Q2MKA5 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Chrna5Q2MKA5 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Chrna5Q2MKA5 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Chrna5Q2MKA5 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Chrna5Q2MKA5 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chrna5Q2MKA5 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chrna5Q2MKA5 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chrna5Q2MKA5 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Chrna5Q2MKA5 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC18.18■□□□□ 0.5
Chrna5Q2MKA5 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.18■□□□□ 0.5
Chrna5Q2MKA5 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chrna5Q2MKA5 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Chrna5Q2MKA5 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chrna5Q2MKA5 Syt7-205ENSMUST00000224135 1557 ntBASIC18.18■□□□□ 0.5
Chrna5Q2MKA5 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Chrna5Q2MKA5 AC124751.1-201ENSMUST00000222716 1408 ntBASIC18.18■□□□□ 0.5
Chrna5Q2MKA5 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chrna5Q2MKA5 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Chrna5Q2MKA5 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC18.18■□□□□ 0.5
Chrna5Q2MKA5 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Chrna5Q2MKA5 Gm27920-201ENSMUST00000183953 96 ntBASIC18.18■□□□□ 0.5
Chrna5Q2MKA5 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Chrna5Q2MKA5 Klk2-ps-201ENSMUST00000205342 571 ntBASIC18.18■□□□□ 0.5
Chrna5Q2MKA5 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Chrna5Q2MKA5 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Chrna5Q2MKA5 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Chrna5Q2MKA5 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chrna5Q2MKA5 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Chrna5Q2MKA5 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chrna5Q2MKA5 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chrna5Q2MKA5 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chrna5Q2MKA5 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Chrna5Q2MKA5 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chrna5Q2MKA5 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chrna5Q2MKA5 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chrna5Q2MKA5 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Chrna5Q2MKA5 Gm7488-201ENSMUST00000117148 684 ntBASIC18.17■□□□□ 0.5
Chrna5Q2MKA5 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC18.17■□□□□ 0.5
Chrna5Q2MKA5 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC18.17■□□□□ 0.5
Chrna5Q2MKA5 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Chrna5Q2MKA5 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC18.17■□□□□ 0.5
Chrna5Q2MKA5 Gm18049-201ENSMUST00000208909 581 ntBASIC18.17■□□□□ 0.5
Chrna5Q2MKA5 Gm7653-201ENSMUST00000214567 508 ntBASIC18.17■□□□□ 0.5
Chrna5Q2MKA5 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chrna5Q2MKA5 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Chrna5Q2MKA5 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms