Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col19a1Q0VF58 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col19a1Q0VF58 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col19a1Q0VF58 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Col19a1Q0VF58 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.31■□□□□ 0.2
Col19a1Q0VF58 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
Col19a1Q0VF58 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col19a1Q0VF58 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col19a1Q0VF58 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.31■□□□□ 0.2
Col19a1Q0VF58 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.31■□□□□ 0.2
Col19a1Q0VF58 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Col19a1Q0VF58 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col19a1Q0VF58 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col19a1Q0VF58 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Col19a1Q0VF58 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col19a1Q0VF58 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col19a1Q0VF58 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Col19a1Q0VF58 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.3■□□□□ 0.2
Col19a1Q0VF58 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Col19a1Q0VF58 Gm42466-201ENSMUST00000202099 1301 ntBASIC16.3■□□□□ 0.2
Col19a1Q0VF58 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.3■□□□□ 0.2
Col19a1Q0VF58 Gm11918-201ENSMUST00000121660 179 ntBASIC16.3■□□□□ 0.2
Col19a1Q0VF58 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Col19a1Q0VF58 Gm9719-201ENSMUST00000162765 543 ntBASIC16.3■□□□□ 0.2
Col19a1Q0VF58 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC16.3■□□□□ 0.2
Col19a1Q0VF58 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Col19a1Q0VF58 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col19a1Q0VF58 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col19a1Q0VF58 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Col19a1Q0VF58 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Col19a1Q0VF58 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col19a1Q0VF58 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col19a1Q0VF58 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col19a1Q0VF58 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Col19a1Q0VF58 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col19a1Q0VF58 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col19a1Q0VF58 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col19a1Q0VF58 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col19a1Q0VF58 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col19a1Q0VF58 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col19a1Q0VF58 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col19a1Q0VF58 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Col19a1Q0VF58 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Col19a1Q0VF58 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col19a1Q0VF58 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.29■□□□□ 0.2
Col19a1Q0VF58 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Col19a1Q0VF58 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col19a1Q0VF58 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Col19a1Q0VF58 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col19a1Q0VF58 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Col19a1Q0VF58 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col19a1Q0VF58 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col19a1Q0VF58 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col19a1Q0VF58 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col19a1Q0VF58 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col19a1Q0VF58 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col19a1Q0VF58 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Col19a1Q0VF58 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col19a1Q0VF58 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col19a1Q0VF58 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col19a1Q0VF58 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col19a1Q0VF58 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC16.28■□□□□ 0.2
Col19a1Q0VF58 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col19a1Q0VF58 AC166349.1-201ENSMUST00000220866 695 ntBASIC16.28■□□□□ 0.2
Col19a1Q0VF58 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col19a1Q0VF58 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Col19a1Q0VF58 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col19a1Q0VF58 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col19a1Q0VF58 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col19a1Q0VF58 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Col19a1Q0VF58 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col19a1Q0VF58 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col19a1Q0VF58 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col19a1Q0VF58 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.27■□□□□ 0.2
Col19a1Q0VF58 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col19a1Q0VF58 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col19a1Q0VF58 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col19a1Q0VF58 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col19a1Q0VF58 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col19a1Q0VF58 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col19a1Q0VF58 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col19a1Q0VF58 Gm5566-201ENSMUST00000116118 459 ntBASIC16.27■□□□□ 0.2
Col19a1Q0VF58 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.27■□□□□ 0.2
Col19a1Q0VF58 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.27■□□□□ 0.2
Col19a1Q0VF58 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.27■□□□□ 0.2
Col19a1Q0VF58 Gm9522-201ENSMUST00000182394 926 ntBASIC16.27■□□□□ 0.2
Col19a1Q0VF58 Gm46209-201ENSMUST00000217912 553 ntBASIC16.27■□□□□ 0.2
Col19a1Q0VF58 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col19a1Q0VF58 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col19a1Q0VF58 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col19a1Q0VF58 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Col19a1Q0VF58 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col19a1Q0VF58 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Col19a1Q0VF58 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col19a1Q0VF58 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Col19a1Q0VF58 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col19a1Q0VF58 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Col19a1Q0VF58 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.27■□□□□ 0.19
Col19a1Q0VF58 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Col19a1Q0VF58 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms