Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.21□□□□□ -0.29
Smn1P97801 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC13.21□□□□□ -0.29
Smn1P97801 Gm22697-201ENSMUST00000175194 63 ntBASIC13.21□□□□□ -0.29
Smn1P97801 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13.21□□□□□ -0.29
Smn1P97801 Gm43799-201ENSMUST00000201845 579 ntBASIC13.21□□□□□ -0.29
Smn1P97801 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smn1P97801 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Smn1P97801 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smn1P97801 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.21□□□□□ -0.29
Smn1P97801 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smn1P97801 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smn1P97801 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Smn1P97801 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smn1P97801 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smn1P97801 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Smn1P97801 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smn1P97801 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smn1P97801 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smn1P97801 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smn1P97801 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smn1P97801 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Smn1P97801 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smn1P97801 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Smn1P97801 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smn1P97801 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smn1P97801 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.2□□□□□ -0.3
Smn1P97801 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smn1P97801 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smn1P97801 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smn1P97801 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smn1P97801 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smn1P97801 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Smn1P97801 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smn1P97801 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smn1P97801 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smn1P97801 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smn1P97801 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smn1P97801 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smn1P97801 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Smn1P97801 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smn1P97801 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smn1P97801 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smn1P97801 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.2□□□□□ -0.3
Smn1P97801 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smn1P97801 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smn1P97801 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smn1P97801 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smn1P97801 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smn1P97801 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smn1P97801 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smn1P97801 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smn1P97801 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smn1P97801 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smn1P97801 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.19□□□□□ -0.3
Smn1P97801 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smn1P97801 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smn1P97801 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smn1P97801 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smn1P97801 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Smn1P97801 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smn1P97801 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smn1P97801 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smn1P97801 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smn1P97801 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.19□□□□□ -0.3
Smn1P97801 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smn1P97801 Mir770-201ENSMUST00000103252 94 ntBASIC13.19□□□□□ -0.3
Smn1P97801 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smn1P97801 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smn1P97801 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smn1P97801 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smn1P97801 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smn1P97801 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Smn1P97801 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.19□□□□□ -0.3
Smn1P97801 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Smn1P97801 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smn1P97801 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Smn1P97801 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
Smn1P97801 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.19□□□□□ -0.3
Smn1P97801 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Smn1P97801 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smn1P97801 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smn1P97801 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smn1P97801 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smn1P97801 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smn1P97801 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Smn1P97801 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smn1P97801 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smn1P97801 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smn1P97801 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smn1P97801 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.18□□□□□ -0.3
Smn1P97801 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.18□□□□□ -0.3
Smn1P97801 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Smn1P97801 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.18□□□□□ -0.3
Smn1P97801 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.18□□□□□ -0.3
Smn1P97801 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smn1P97801 Gm18101-201ENSMUST00000215769 548 ntBASIC13.18□□□□□ -0.3
Smn1P97801 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC13.18□□□□□ -0.3
Smn1P97801 Gm9987-201ENSMUST00000069768 567 ntBASIC13.18□□□□□ -0.3
Smn1P97801 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smn1P97801 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms