Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb1P63158 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb1P63158 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC16.93■□□□□ 0.3
Hmgb1P63158 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb1P63158 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb1P63158 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb1P63158 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Hmgb1P63158 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb1P63158 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb1P63158 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Hmgb1P63158 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Hmgb1P63158 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb1P63158 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb1P63158 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.93■□□□□ 0.3
Hmgb1P63158 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb1P63158 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb1P63158 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb1P63158 Gm4459-201ENSMUST00000118750 468 ntBASIC16.93■□□□□ 0.3
Hmgb1P63158 Gm27357-201ENSMUST00000183754 135 ntBASIC16.93■□□□□ 0.3
Hmgb1P63158 Gm27867-201ENSMUST00000184778 125 ntBASIC16.93■□□□□ 0.3
Hmgb1P63158 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.93■□□□□ 0.3
Hmgb1P63158 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.93■□□□□ 0.3
Hmgb1P63158 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.93■□□□□ 0.3
Hmgb1P63158 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb1P63158 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.93■□□□□ 0.3
Hmgb1P63158 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb1P63158 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb1P63158 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Hmgb1P63158 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb1P63158 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.93■□□□□ 0.3
Hmgb1P63158 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.93■□□□□ 0.3
Hmgb1P63158 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb1P63158 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Hmgb1P63158 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.93■□□□□ 0.3
Hmgb1P63158 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Hmgb1P63158 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb1P63158 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb1P63158 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hmgb1P63158 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.92■□□□□ 0.3
Hmgb1P63158 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Hmgb1P63158 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Hmgb1P63158 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgb1P63158 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Hmgb1P63158 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgb1P63158 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgb1P63158 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgb1P63158 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgb1P63158 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.92■□□□□ 0.3
Hmgb1P63158 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Hmgb1P63158 Gm7284-201ENSMUST00000131667 944 ntBASIC16.92■□□□□ 0.3
Hmgb1P63158 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgb1P63158 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgb1P63158 Gm8655-201ENSMUST00000221159 852 ntBASIC16.92■□□□□ 0.3
Hmgb1P63158 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.92■□□□□ 0.3
Hmgb1P63158 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.92■□□□□ 0.3
Hmgb1P63158 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgb1P63158 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.92■□□□□ 0.3
Hmgb1P63158 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Hmgb1P63158 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgb1P63158 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgb1P63158 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgb1P63158 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Hmgb1P63158 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgb1P63158 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Hmgb1P63158 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgb1P63158 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgb1P63158 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Hmgb1P63158 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hmgb1P63158 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.92■□□□□ 0.3
Hmgb1P63158 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Hmgb1P63158 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb1P63158 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Hmgb1P63158 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb1P63158 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb1P63158 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.91■□□□□ 0.3
Hmgb1P63158 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb1P63158 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.91■□□□□ 0.3
Hmgb1P63158 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Hmgb1P63158 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb1P63158 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb1P63158 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Hmgb1P63158 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb1P63158 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb1P63158 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.91■□□□□ 0.3
Hmgb1P63158 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb1P63158 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.91■□□□□ 0.3
Hmgb1P63158 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Hmgb1P63158 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb1P63158 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb1P63158 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Hmgb1P63158 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb1P63158 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb1P63158 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Hmgb1P63158 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb1P63158 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Hmgb1P63158 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb1P63158 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb1P63158 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb1P63158 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hmgb1P63158 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms