Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gabra1P62812 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gabra1P62812 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gabra1P62812 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gabra1P62812 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gabra1P62812 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gabra1P62812 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gabra1P62812 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gabra1P62812 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gabra1P62812 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Gabra1P62812 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gabra1P62812 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gabra1P62812 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Gabra1P62812 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Gabra1P62812 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gabra1P62812 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gabra1P62812 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gabra1P62812 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Gabra1P62812 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gabra1P62812 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC12.98□□□□□ -0.33
Gabra1P62812 Gm12527-201ENSMUST00000117967 564 ntBASIC12.98□□□□□ -0.33
Gabra1P62812 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.98□□□□□ -0.33
Gabra1P62812 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.98□□□□□ -0.33
Gabra1P62812 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.98□□□□□ -0.33
Gabra1P62812 AC135637.1-201ENSMUST00000227750 365 ntBASIC12.98□□□□□ -0.33
Gabra1P62812 Odf3b-204ENSMUST00000227834 930 ntBASIC12.98□□□□□ -0.33
Gabra1P62812 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gabra1P62812 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gabra1P62812 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Gabra1P62812 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gabra1P62812 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.98□□□□□ -0.33
Gabra1P62812 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gabra1P62812 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gabra1P62812 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gabra1P62812 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Gabra1P62812 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gabra1P62812 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gabra1P62812 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Gabra1P62812 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Gabra1P62812 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gabra1P62812 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gabra1P62812 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gabra1P62812 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gabra1P62812 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.97□□□□□ -0.33
Gabra1P62812 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gabra1P62812 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Gabra1P62812 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gabra1P62812 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.97□□□□□ -0.33
Gabra1P62812 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.97□□□□□ -0.33
Gabra1P62812 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.97□□□□□ -0.33
Gabra1P62812 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gabra1P62812 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.97□□□□□ -0.33
Gabra1P62812 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.97□□□□□ -0.33
Gabra1P62812 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gabra1P62812 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.97□□□□□ -0.33
Gabra1P62812 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC12.97□□□□□ -0.33
Gabra1P62812 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Gabra1P62812 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gabra1P62812 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Gabra1P62812 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Gabra1P62812 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gabra1P62812 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gabra1P62812 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.97□□□□□ -0.33
Gabra1P62812 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gabra1P62812 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gabra1P62812 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gabra1P62812 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gabra1P62812 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gabra1P62812 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gabra1P62812 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gabra1P62812 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Gabra1P62812 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Gabra1P62812 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gabra1P62812 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Gabra1P62812 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gabra1P62812 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gabra1P62812 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gabra1P62812 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Gabra1P62812 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Gabra1P62812 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gabra1P62812 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Gabra1P62812 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gabra1P62812 Mir1199-201ENSMUST00000117015 119 ntBASIC12.96□□□□□ -0.33
Gabra1P62812 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Gabra1P62812 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC12.96□□□□□ -0.33
Gabra1P62812 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC12.96□□□□□ -0.33
Gabra1P62812 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.96□□□□□ -0.33
Gabra1P62812 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gabra1P62812 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gabra1P62812 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Gabra1P62812 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Gabra1P62812 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gabra1P62812 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
Gabra1P62812 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gabra1P62812 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gabra1P62812 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gabra1P62812 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gabra1P62812 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Gabra1P62812 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gabra1P62812 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms