Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Lmo4P61969 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC12.4□□□□□ -0.43
Lmo4P61969 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lmo4P61969 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lmo4P61969 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lmo4P61969 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lmo4P61969 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lmo4P61969 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lmo4P61969 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Lmo4P61969 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lmo4P61969 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Lmo4P61969 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lmo4P61969 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.39□□□□□ -0.43
Lmo4P61969 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lmo4P61969 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.39□□□□□ -0.43
Lmo4P61969 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.39□□□□□ -0.43
Lmo4P61969 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.39□□□□□ -0.43
Lmo4P61969 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Lmo4P61969 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.39□□□□□ -0.43
Lmo4P61969 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.39□□□□□ -0.43
Lmo4P61969 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Lmo4P61969 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lmo4P61969 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lmo4P61969 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Lmo4P61969 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lmo4P61969 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lmo4P61969 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lmo4P61969 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lmo4P61969 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Lmo4P61969 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lmo4P61969 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Lmo4P61969 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lmo4P61969 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lmo4P61969 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Lmo4P61969 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lmo4P61969 Gm20628-201ENSMUST00000177363 3215 ntBASIC12.38□□□□□ -0.43
Lmo4P61969 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Lmo4P61969 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lmo4P61969 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lmo4P61969 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lmo4P61969 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lmo4P61969 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lmo4P61969 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lmo4P61969 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lmo4P61969 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lmo4P61969 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lmo4P61969 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.38□□□□□ -0.43
Lmo4P61969 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.38□□□□□ -0.43
Lmo4P61969 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Lmo4P61969 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lmo4P61969 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.38□□□□□ -0.43
Lmo4P61969 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.38□□□□□ -0.43
Lmo4P61969 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.38□□□□□ -0.43
Lmo4P61969 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lmo4P61969 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lmo4P61969 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lmo4P61969 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Lmo4P61969 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lmo4P61969 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Lmo4P61969 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lmo4P61969 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.38□□□□□ -0.43
Lmo4P61969 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lmo4P61969 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lmo4P61969 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lmo4P61969 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lmo4P61969 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lmo4P61969 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lmo4P61969 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lmo4P61969 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lmo4P61969 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lmo4P61969 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lmo4P61969 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lmo4P61969 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lmo4P61969 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.37□□□□□ -0.43
Lmo4P61969 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.37□□□□□ -0.43
Lmo4P61969 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lmo4P61969 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.37□□□□□ -0.43
Lmo4P61969 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lmo4P61969 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.37□□□□□ -0.43
Lmo4P61969 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.37□□□□□ -0.43
Lmo4P61969 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lmo4P61969 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.37□□□□□ -0.43
Lmo4P61969 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lmo4P61969 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lmo4P61969 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lmo4P61969 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lmo4P61969 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lmo4P61969 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lmo4P61969 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Lmo4P61969 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lmo4P61969 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lmo4P61969 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Lmo4P61969 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lmo4P61969 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lmo4P61969 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Lmo4P61969 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.37□□□□□ -0.43
Lmo4P61969 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lmo4P61969 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lmo4P61969 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lmo4P61969 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms