Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ube2d3P61079 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ube2d3P61079 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ube2d3P61079 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Ube2d3P61079 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ube2d3P61079 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ube2d3P61079 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ube2d3P61079 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Ube2d3P61079 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC11.04□□□□□ -0.64
Ube2d3P61079 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ube2d3P61079 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.04□□□□□ -0.64
Ube2d3P61079 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ube2d3P61079 Gm8258-201ENSMUST00000055593 1449 ntBASIC11.04□□□□□ -0.64
Ube2d3P61079 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ube2d3P61079 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ube2d3P61079 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Ube2d3P61079 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ube2d3P61079 Gm25016-201ENSMUST00000158399 131 ntBASIC11.04□□□□□ -0.64
Ube2d3P61079 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Ube2d3P61079 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC11.04□□□□□ -0.64
Ube2d3P61079 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ube2d3P61079 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ube2d3P61079 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC11.04□□□□□ -0.64
Ube2d3P61079 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Ube2d3P61079 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ube2d3P61079 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Ube2d3P61079 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ube2d3P61079 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.04□□□□□ -0.64
Ube2d3P61079 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ube2d3P61079 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Ube2d3P61079 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ube2d3P61079 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ube2d3P61079 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC11.04□□□□□ -0.64
Ube2d3P61079 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ube2d3P61079 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ube2d3P61079 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ube2d3P61079 BC037039-201ENSMUST00000192003 2205 ntBASIC11.04□□□□□ -0.64
Ube2d3P61079 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ube2d3P61079 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ube2d3P61079 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ube2d3P61079 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ube2d3P61079 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ube2d3P61079 Gm13034-201ENSMUST00000121342 3177 ntBASIC11.04□□□□□ -0.64
Ube2d3P61079 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ube2d3P61079 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ube2d3P61079 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ube2d3P61079 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ube2d3P61079 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ube2d3P61079 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ube2d3P61079 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Ube2d3P61079 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ube2d3P61079 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ube2d3P61079 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Ube2d3P61079 Tfap2a-203ENSMUST00000223869 2037 ntBASIC11.03□□□□□ -0.64
Ube2d3P61079 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ube2d3P61079 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ube2d3P61079 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ube2d3P61079 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ube2d3P61079 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ube2d3P61079 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC11.03□□□□□ -0.64
Ube2d3P61079 Ighv6-1-201ENSMUST00000193612 343 ntBASIC11.03□□□□□ -0.64
Ube2d3P61079 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ube2d3P61079 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ube2d3P61079 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ube2d3P61079 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ube2d3P61079 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ube2d3P61079 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ube2d3P61079 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ube2d3P61079 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ube2d3P61079 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ube2d3P61079 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC11.03□□□□□ -0.64
Ube2d3P61079 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC11.03□□□□□ -0.64
Ube2d3P61079 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ube2d3P61079 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ube2d3P61079 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ube2d3P61079 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ube2d3P61079 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ube2d3P61079 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ube2d3P61079 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ube2d3P61079 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ube2d3P61079 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ube2d3P61079 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Ube2d3P61079 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.64
Ube2d3P61079 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ube2d3P61079 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ube2d3P61079 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Ube2d3P61079 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ube2d3P61079 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Ube2d3P61079 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ube2d3P61079 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ube2d3P61079 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Ube2d3P61079 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ube2d3P61079 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Ube2d3P61079 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Ube2d3P61079 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ube2d3P61079 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ube2d3P61079 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Ube2d3P61079 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ube2d3P61079 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ube2d3P61079 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms