Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.68□□□□□ -0.22
Sf3b6P59708 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3b6P59708 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Sf3b6P59708 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3b6P59708 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sf3b6P59708 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Sf3b6P59708 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3b6P59708 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.67□□□□□ -0.22
Sf3b6P59708 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.67□□□□□ -0.22
Sf3b6P59708 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3b6P59708 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.67□□□□□ -0.22
Sf3b6P59708 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3b6P59708 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3b6P59708 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3b6P59708 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3b6P59708 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3b6P59708 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3b6P59708 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3b6P59708 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Sf3b6P59708 Gm23634-201ENSMUST00000175071 91 ntBASIC13.67□□□□□ -0.22
Sf3b6P59708 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Sf3b6P59708 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.67□□□□□ -0.22
Sf3b6P59708 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3b6P59708 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3b6P59708 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3b6P59708 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3b6P59708 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3b6P59708 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Sf3b6P59708 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Sf3b6P59708 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Sf3b6P59708 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3b6P59708 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3b6P59708 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3b6P59708 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.67□□□□□ -0.22
Sf3b6P59708 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3b6P59708 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Sf3b6P59708 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3b6P59708 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Sf3b6P59708 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3b6P59708 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3b6P59708 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Sf3b6P59708 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3b6P59708 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Sf3b6P59708 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3b6P59708 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Sf3b6P59708 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3b6P59708 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3b6P59708 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3b6P59708 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Sf3b6P59708 AA414768-201ENSMUST00000121924 1257 ntBASIC13.66□□□□□ -0.22
Sf3b6P59708 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3b6P59708 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.66□□□□□ -0.22
Sf3b6P59708 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3b6P59708 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3b6P59708 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3b6P59708 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3b6P59708 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3b6P59708 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3b6P59708 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3b6P59708 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3b6P59708 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3b6P59708 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3b6P59708 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sf3b6P59708 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b6P59708 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b6P59708 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b6P59708 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b6P59708 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b6P59708 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b6P59708 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b6P59708 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.65□□□□□ -0.22
Sf3b6P59708 Gm11355-201ENSMUST00000121120 306 ntBASIC13.65□□□□□ -0.22
Sf3b6P59708 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b6P59708 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.65□□□□□ -0.22
Sf3b6P59708 Gm37722-201ENSMUST00000193757 208 ntBASIC13.65□□□□□ -0.22
Sf3b6P59708 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Sf3b6P59708 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b6P59708 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b6P59708 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b6P59708 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b6P59708 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b6P59708 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.65□□□□□ -0.22
Sf3b6P59708 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b6P59708 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Sf3b6P59708 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
Sf3b6P59708 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b6P59708 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b6P59708 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sf3b6P59708 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Sf3b6P59708 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Sf3b6P59708 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Sf3b6P59708 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Sf3b6P59708 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3b6P59708 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3b6P59708 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3b6P59708 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3b6P59708 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3b6P59708 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3b6P59708 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sf3b6P59708 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms