Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sssca1P56873 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sssca1P56873 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sssca1P56873 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sssca1P56873 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sssca1P56873 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Sssca1P56873 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.45□□□□□ -0.42
Sssca1P56873 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sssca1P56873 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sssca1P56873 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sssca1P56873 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sssca1P56873 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sssca1P56873 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sssca1P56873 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sssca1P56873 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sssca1P56873 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sssca1P56873 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.45□□□□□ -0.42
Sssca1P56873 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sssca1P56873 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sssca1P56873 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sssca1P56873 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sssca1P56873 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sssca1P56873 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sssca1P56873 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Sssca1P56873 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sssca1P56873 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sssca1P56873 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sssca1P56873 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.45□□□□□ -0.42
Sssca1P56873 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sssca1P56873 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.45□□□□□ -0.42
Sssca1P56873 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sssca1P56873 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.45□□□□□ -0.42
Sssca1P56873 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Sssca1P56873 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sssca1P56873 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sssca1P56873 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sssca1P56873 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sssca1P56873 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sssca1P56873 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sssca1P56873 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sssca1P56873 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sssca1P56873 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sssca1P56873 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sssca1P56873 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.44□□□□□ -0.42
Sssca1P56873 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sssca1P56873 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sssca1P56873 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sssca1P56873 Mir770-201ENSMUST00000103252 94 ntBASIC12.44□□□□□ -0.42
Sssca1P56873 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sssca1P56873 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.44□□□□□ -0.42
Sssca1P56873 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.44□□□□□ -0.42
Sssca1P56873 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sssca1P56873 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.44□□□□□ -0.42
Sssca1P56873 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Sssca1P56873 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.44□□□□□ -0.42
Sssca1P56873 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sssca1P56873 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sssca1P56873 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sssca1P56873 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sssca1P56873 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sssca1P56873 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sssca1P56873 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sssca1P56873 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sssca1P56873 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Sssca1P56873 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sssca1P56873 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sssca1P56873 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sssca1P56873 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sssca1P56873 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sssca1P56873 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sssca1P56873 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sssca1P56873 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sssca1P56873 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sssca1P56873 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sssca1P56873 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sssca1P56873 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sssca1P56873 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Sssca1P56873 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sssca1P56873 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.43□□□□□ -0.42
Sssca1P56873 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.43□□□□□ -0.42
Sssca1P56873 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC12.43□□□□□ -0.42
Sssca1P56873 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Sssca1P56873 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.43□□□□□ -0.42
Sssca1P56873 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sssca1P56873 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sssca1P56873 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sssca1P56873 Gm7367-201ENSMUST00000057611 492 ntBASIC12.43□□□□□ -0.42
Sssca1P56873 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sssca1P56873 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sssca1P56873 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sssca1P56873 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sssca1P56873 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sssca1P56873 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sssca1P56873 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sssca1P56873 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Sssca1P56873 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Sssca1P56873 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sssca1P56873 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Sssca1P56873 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Sssca1P56873 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms