Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox3P53784 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox3P53784 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox3P53784 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox3P53784 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Sox3P53784 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox3P53784 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sox3P53784 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox3P53784 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox3P53784 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox3P53784 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.74□□□□□ -0.05
Sox3P53784 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.74□□□□□ -0.05
Sox3P53784 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Sox3P53784 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox3P53784 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Sox3P53784 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Sox3P53784 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.74□□□□□ -0.05
Sox3P53784 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.74□□□□□ -0.05
Sox3P53784 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.74□□□□□ -0.05
Sox3P53784 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox3P53784 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox3P53784 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.74□□□□□ -0.05
Sox3P53784 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox3P53784 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sox3P53784 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox3P53784 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox3P53784 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox3P53784 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox3P53784 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Sox3P53784 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox3P53784 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox3P53784 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sox3P53784 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox3P53784 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sox3P53784 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox3P53784 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox3P53784 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Sox3P53784 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox3P53784 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox3P53784 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sox3P53784 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox3P53784 Gm12497-201ENSMUST00000138778 237 ntBASIC14.73□□□□□ -0.05
Sox3P53784 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sox3P53784 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.73□□□□□ -0.05
Sox3P53784 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sox3P53784 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox3P53784 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Sox3P53784 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox3P53784 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox3P53784 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.73□□□□□ -0.05
Sox3P53784 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox3P53784 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Sox3P53784 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox3P53784 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox3P53784 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Sox3P53784 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
Sox3P53784 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox3P53784 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.72□□□□□ -0.05
Sox3P53784 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox3P53784 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox3P53784 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Sox3P53784 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sox3P53784 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox3P53784 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Sox3P53784 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox3P53784 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox3P53784 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox3P53784 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.72□□□□□ -0.05
Sox3P53784 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.72□□□□□ -0.05
Sox3P53784 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Sox3P53784 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.72□□□□□ -0.05
Sox3P53784 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.72□□□□□ -0.05
Sox3P53784 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Sox3P53784 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Sox3P53784 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox3P53784 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Sox3P53784 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.72□□□□□ -0.05
Sox3P53784 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox3P53784 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sox3P53784 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox3P53784 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox3P53784 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Sox3P53784 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox3P53784 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox3P53784 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox3P53784 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox3P53784 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox3P53784 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox3P53784 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox3P53784 Asic1-205ENSMUST00000228185 1818 ntBASIC14.71□□□□□ -0.05
Sox3P53784 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox3P53784 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox3P53784 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.71□□□□□ -0.05
Sox3P53784 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox3P53784 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox3P53784 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sox3P53784 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.71□□□□□ -0.05
Sox3P53784 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.71□□□□□ -0.05
Sox3P53784 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.71□□□□□ -0.05
Sox3P53784 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms