Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.15■□□□□ 0.34
Nek1P51954 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.15■□□□□ 0.34
Nek1P51954 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.15■□□□□ 0.34
Nek1P51954 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nek1P51954 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.15■□□□□ 0.34
Nek1P51954 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nek1P51954 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nek1P51954 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nek1P51954 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nek1P51954 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
Nek1P51954 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nek1P51954 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nek1P51954 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nek1P51954 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.15■□□□□ 0.34
Nek1P51954 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nek1P51954 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Nek1P51954 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Nek1P51954 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nek1P51954 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nek1P51954 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Nek1P51954 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nek1P51954 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nek1P51954 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nek1P51954 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nek1P51954 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nek1P51954 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Nek1P51954 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nek1P51954 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nek1P51954 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nek1P51954 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nek1P51954 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nek1P51954 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nek1P51954 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nek1P51954 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nek1P51954 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nek1P51954 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nek1P51954 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Nek1P51954 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nek1P51954 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nek1P51954 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nek1P51954 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Nek1P51954 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nek1P51954 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.13■□□□□ 0.33
Nek1P51954 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nek1P51954 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Nek1P51954 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nek1P51954 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nek1P51954 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Nek1P51954 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.13■□□□□ 0.33
Nek1P51954 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nek1P51954 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.13■□□□□ 0.33
Nek1P51954 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nek1P51954 Gm2651-201ENSMUST00000203560 838 ntBASIC17.13■□□□□ 0.33
Nek1P51954 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Nek1P51954 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.13■□□□□ 0.33
Nek1P51954 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.13■□□□□ 0.33
Nek1P51954 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nek1P51954 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Nek1P51954 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nek1P51954 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nek1P51954 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nek1P51954 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nek1P51954 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Nek1P51954 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nek1P51954 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nek1P51954 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nek1P51954 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nek1P51954 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Nek1P51954 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Nek1P51954 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nek1P51954 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Nek1P51954 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nek1P51954 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nek1P51954 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nek1P51954 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Nek1P51954 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nek1P51954 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Nek1P51954 Gm15372-201ENSMUST00000120729 834 ntBASIC17.12■□□□□ 0.33
Nek1P51954 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nek1P51954 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nek1P51954 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.12■□□□□ 0.33
Nek1P51954 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nek1P51954 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC17.12■□□□□ 0.33
Nek1P51954 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Nek1P51954 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.12■□□□□ 0.33
Nek1P51954 AC154532.1-201ENSMUST00000227860 965 ntBASIC17.12■□□□□ 0.33
Nek1P51954 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nek1P51954 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nek1P51954 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nek1P51954 Rps4l-201ENSMUST00000071745 943 ntBASIC17.12■□□□□ 0.33
Nek1P51954 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nek1P51954 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Nek1P51954 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nek1P51954 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nek1P51954 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nek1P51954 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Nek1P51954 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.12■□□□□ 0.33
Nek1P51954 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nek1P51954 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.12■□□□□ 0.33
Nek1P51954 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms