Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rph3aP47708 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rph3aP47708 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rph3aP47708 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rph3aP47708 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rph3aP47708 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rph3aP47708 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rph3aP47708 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rph3aP47708 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.84□□□□□ -0.03
Rph3aP47708 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rph3aP47708 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Rph3aP47708 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Rph3aP47708 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rph3aP47708 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rph3aP47708 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Rph3aP47708 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
Rph3aP47708 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rph3aP47708 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rph3aP47708 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rph3aP47708 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rph3aP47708 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rph3aP47708 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rph3aP47708 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rph3aP47708 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rph3aP47708 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.84□□□□□ -0.03
Rph3aP47708 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rph3aP47708 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rph3aP47708 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Rph3aP47708 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rph3aP47708 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Rph3aP47708 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rph3aP47708 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Rph3aP47708 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Rph3aP47708 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Rph3aP47708 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rph3aP47708 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rph3aP47708 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rph3aP47708 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rph3aP47708 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rph3aP47708 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rph3aP47708 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.83□□□□□ -0.04
Rph3aP47708 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rph3aP47708 Gm11780-201ENSMUST00000136880 516 ntBASIC14.83□□□□□ -0.04
Rph3aP47708 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.83□□□□□ -0.04
Rph3aP47708 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rph3aP47708 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.83□□□□□ -0.04
Rph3aP47708 Gm6296-201ENSMUST00000222599 943 ntBASIC14.83□□□□□ -0.04
Rph3aP47708 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rph3aP47708 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rph3aP47708 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.83□□□□□ -0.04
Rph3aP47708 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rph3aP47708 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.83□□□□□ -0.04
Rph3aP47708 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rph3aP47708 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Rph3aP47708 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rph3aP47708 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rph3aP47708 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rph3aP47708 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rph3aP47708 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Rph3aP47708 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rph3aP47708 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rph3aP47708 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rph3aP47708 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rph3aP47708 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rph3aP47708 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Rph3aP47708 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rph3aP47708 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rph3aP47708 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.82□□□□□ -0.04
Rph3aP47708 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rph3aP47708 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rph3aP47708 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.82□□□□□ -0.04
Rph3aP47708 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rph3aP47708 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Rph3aP47708 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Rph3aP47708 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.82□□□□□ -0.04
Rph3aP47708 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rph3aP47708 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.82□□□□□ -0.04
Rph3aP47708 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rph3aP47708 Gm6376-201ENSMUST00000209407 580 ntBASIC14.82□□□□□ -0.04
Rph3aP47708 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.82□□□□□ -0.04
Rph3aP47708 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.82□□□□□ -0.04
Rph3aP47708 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.82□□□□□ -0.04
Rph3aP47708 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.82□□□□□ -0.04
Rph3aP47708 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rph3aP47708 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Rph3aP47708 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rph3aP47708 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rph3aP47708 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rph3aP47708 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rph3aP47708 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rph3aP47708 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Rph3aP47708 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rph3aP47708 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rph3aP47708 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rph3aP47708 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
Rph3aP47708 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.82□□□□□ -0.04
Rph3aP47708 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rph3aP47708 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Rph3aP47708 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Rph3aP47708 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms