Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm27306-201ENSMUST00000183970 107 ntBASIC14.73□□□□□ -0.05
Sox18P43680 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.73□□□□□ -0.05
Sox18P43680 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sox18P43680 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Sox18P43680 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.73□□□□□ -0.05
Sox18P43680 Gm7653-201ENSMUST00000214567 508 ntBASIC14.73□□□□□ -0.05
Sox18P43680 Gm5779-201ENSMUST00000218467 910 ntBASIC14.73□□□□□ -0.05
Sox18P43680 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.73□□□□□ -0.05
Sox18P43680 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox18P43680 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox18P43680 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox18P43680 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.73□□□□□ -0.05
Sox18P43680 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox18P43680 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox18P43680 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox18P43680 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox18P43680 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Sox18P43680 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox18P43680 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox18P43680 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sox18P43680 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
Sox18P43680 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Sox18P43680 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox18P43680 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox18P43680 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sox18P43680 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Sox18P43680 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sox18P43680 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox18P43680 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Sox18P43680 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.72□□□□□ -0.05
Sox18P43680 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.72□□□□□ -0.05
Sox18P43680 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.72□□□□□ -0.05
Sox18P43680 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox18P43680 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.72□□□□□ -0.05
Sox18P43680 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sox18P43680 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox18P43680 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sox18P43680 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox18P43680 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.72□□□□□ -0.05
Sox18P43680 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox18P43680 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sox18P43680 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox18P43680 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.72□□□□□ -0.05
Sox18P43680 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Sox18P43680 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sox18P43680 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox18P43680 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.72□□□□□ -0.05
Sox18P43680 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox18P43680 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
Sox18P43680 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox18P43680 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Sox18P43680 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox18P43680 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox18P43680 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox18P43680 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox18P43680 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox18P43680 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox18P43680 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox18P43680 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox18P43680 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox18P43680 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox18P43680 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sox18P43680 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox18P43680 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.71□□□□□ -0.05
Sox18P43680 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Sox18P43680 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Sox18P43680 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sox18P43680 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox18P43680 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Sox18P43680 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox18P43680 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox18P43680 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sox18P43680 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sox18P43680 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sox18P43680 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sox18P43680 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Sox18P43680 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Sox18P43680 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sox18P43680 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Sox18P43680 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox18P43680 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox18P43680 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox18P43680 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sox18P43680 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Sox18P43680 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox18P43680 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox18P43680 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.7□□□□□ -0.06
Sox18P43680 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox18P43680 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.7□□□□□ -0.06
Sox18P43680 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sox18P43680 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox18P43680 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox18P43680 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sox18P43680 Mir7684-201ENSMUST00000183858 60 ntBASIC14.7□□□□□ -0.06
Sox18P43680 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.7□□□□□ -0.06
Sox18P43680 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sox18P43680 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.7□□□□□ -0.06
Sox18P43680 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.7□□□□□ -0.06
Sox18P43680 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sox18P43680 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms