Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hist1h1aP43275 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hist1h1aP43275 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hist1h1aP43275 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hist1h1aP43275 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hist1h1aP43275 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.73□□□□□ -0.37
Hist1h1aP43275 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hist1h1aP43275 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.73□□□□□ -0.37
Hist1h1aP43275 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hist1h1aP43275 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hist1h1aP43275 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hist1h1aP43275 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hist1h1aP43275 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hist1h1aP43275 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hist1h1aP43275 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hist1h1aP43275 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hist1h1aP43275 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hist1h1aP43275 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hist1h1aP43275 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Hist1h1aP43275 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hist1h1aP43275 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hist1h1aP43275 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Hist1h1aP43275 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hist1h1aP43275 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hist1h1aP43275 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hist1h1aP43275 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hist1h1aP43275 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hist1h1aP43275 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hist1h1aP43275 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hist1h1aP43275 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hist1h1aP43275 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hist1h1aP43275 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hist1h1aP43275 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hist1h1aP43275 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hist1h1aP43275 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Hist1h1aP43275 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hist1h1aP43275 Gm6623-201ENSMUST00000173570 544 ntBASIC12.72□□□□□ -0.37
Hist1h1aP43275 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.72□□□□□ -0.37
Hist1h1aP43275 Gm10252-201ENSMUST00000209541 832 ntBASIC12.72□□□□□ -0.37
Hist1h1aP43275 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hist1h1aP43275 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hist1h1aP43275 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Hist1h1aP43275 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Hist1h1aP43275 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hist1h1aP43275 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hist1h1aP43275 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.72□□□□□ -0.37
Hist1h1aP43275 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hist1h1aP43275 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hist1h1aP43275 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hist1h1aP43275 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Hist1h1aP43275 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hist1h1aP43275 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hist1h1aP43275 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hist1h1aP43275 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.72□□□□□ -0.37
Hist1h1aP43275 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hist1h1aP43275 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hist1h1aP43275 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.71□□□□□ -0.37
Hist1h1aP43275 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.71□□□□□ -0.37
Hist1h1aP43275 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hist1h1aP43275 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hist1h1aP43275 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Hist1h1aP43275 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hist1h1aP43275 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hist1h1aP43275 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hist1h1aP43275 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hist1h1aP43275 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.71□□□□□ -0.37
Hist1h1aP43275 Gm9013-201ENSMUST00000132939 882 ntBASIC12.71□□□□□ -0.37
Hist1h1aP43275 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hist1h1aP43275 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.71□□□□□ -0.37
Hist1h1aP43275 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Hist1h1aP43275 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hist1h1aP43275 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hist1h1aP43275 Gm9987-201ENSMUST00000069768 567 ntBASIC12.71□□□□□ -0.37
Hist1h1aP43275 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hist1h1aP43275 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Hist1h1aP43275 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.71□□□□□ -0.37
Hist1h1aP43275 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.71□□□□□ -0.37
Hist1h1aP43275 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Hist1h1aP43275 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Hist1h1aP43275 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.71□□□□□ -0.38
Hist1h1aP43275 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hist1h1aP43275 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Hist1h1aP43275 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hist1h1aP43275 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hist1h1aP43275 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Hist1h1aP43275 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Hist1h1aP43275 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.71□□□□□ -0.38
Hist1h1aP43275 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.7□□□□□ -0.38
Hist1h1aP43275 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hist1h1aP43275 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hist1h1aP43275 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Hist1h1aP43275 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hist1h1aP43275 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hist1h1aP43275 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hist1h1aP43275 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hist1h1aP43275 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hist1h1aP43275 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Hist1h1aP43275 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hist1h1aP43275 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.7□□□□□ -0.38
Hist1h1aP43275 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms