Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Gm44484-201ENSMUST00000199873 138 ntBASIC13.5□□□□□ -0.25
Upk2P38575 Gm44466-201ENSMUST00000200264 138 ntBASIC13.5□□□□□ -0.25
Upk2P38575 Gm44359-201ENSMUST00000200671 138 ntBASIC13.5□□□□□ -0.25
Upk2P38575 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.5□□□□□ -0.25
Upk2P38575 AC130671.1-201ENSMUST00000227384 1237 ntBASIC13.5□□□□□ -0.25
Upk2P38575 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.5□□□□□ -0.25
Upk2P38575 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk2P38575 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk2P38575 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Upk2P38575 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk2P38575 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Upk2P38575 Sybu-209ENSMUST00000228639 4113 ntBASIC13.5□□□□□ -0.25
Upk2P38575 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk2P38575 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk2P38575 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Upk2P38575 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk2P38575 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk2P38575 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk2P38575 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk2P38575 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk2P38575 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk2P38575 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Upk2P38575 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk2P38575 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Upk2P38575 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Upk2P38575 Gm13418-201ENSMUST00000119097 944 ntBASIC13.49□□□□□ -0.25
Upk2P38575 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.49□□□□□ -0.25
Upk2P38575 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.49□□□□□ -0.25
Upk2P38575 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Upk2P38575 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Upk2P38575 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk2P38575 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.49□□□□□ -0.25
Upk2P38575 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Upk2P38575 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk2P38575 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Upk2P38575 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk2P38575 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk2P38575 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Upk2P38575 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk2P38575 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Upk2P38575 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Upk2P38575 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.48□□□□□ -0.25
Upk2P38575 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Upk2P38575 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Upk2P38575 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Upk2P38575 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk2P38575 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk2P38575 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk2P38575 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.48□□□□□ -0.25
Upk2P38575 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Upk2P38575 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.48□□□□□ -0.25
Upk2P38575 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.48□□□□□ -0.25
Upk2P38575 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.48□□□□□ -0.25
Upk2P38575 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk2P38575 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk2P38575 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk2P38575 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Upk2P38575 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Upk2P38575 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk2P38575 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk2P38575 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk2P38575 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Upk2P38575 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk2P38575 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.48□□□□□ -0.25
Upk2P38575 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.48□□□□□ -0.25
Upk2P38575 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk2P38575 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Upk2P38575 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Upk2P38575 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk2P38575 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk2P38575 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk2P38575 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Upk2P38575 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk2P38575 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.47□□□□□ -0.25
Upk2P38575 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk2P38575 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk2P38575 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk2P38575 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk2P38575 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk2P38575 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.47□□□□□ -0.25
Upk2P38575 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Upk2P38575 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk2P38575 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk2P38575 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk2P38575 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk2P38575 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk2P38575 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk2P38575 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Upk2P38575 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk2P38575 Gm6089-201ENSMUST00000197666 938 ntBASIC13.47□□□□□ -0.25
Upk2P38575 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC13.47□□□□□ -0.25
Upk2P38575 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk2P38575 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.47□□□□□ -0.25
Upk2P38575 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk2P38575 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk2P38575 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk2P38575 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Upk2P38575 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk2P38575 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk2P38575 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms