Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Gm7638-201ENSMUST00000121348 967 ntBASIC12.58□□□□□ -0.4
Rab5cP35278 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab5cP35278 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab5cP35278 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab5cP35278 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab5cP35278 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Rab5cP35278 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Rab5cP35278 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.58□□□□□ -0.4
Rab5cP35278 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.58□□□□□ -0.4
Rab5cP35278 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Rab5cP35278 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab5cP35278 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.58□□□□□ -0.4
Rab5cP35278 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rab5cP35278 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab5cP35278 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab5cP35278 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab5cP35278 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab5cP35278 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Rab5cP35278 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rab5cP35278 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Rab5cP35278 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Rab5cP35278 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rab5cP35278 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Rab5cP35278 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.57□□□□□ -0.4
Rab5cP35278 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rab5cP35278 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab5cP35278 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab5cP35278 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Rab5cP35278 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab5cP35278 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab5cP35278 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Rab5cP35278 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab5cP35278 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab5cP35278 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab5cP35278 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab5cP35278 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rab5cP35278 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab5cP35278 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rab5cP35278 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Rab5cP35278 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC12.57□□□□□ -0.4
Rab5cP35278 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.57□□□□□ -0.4
Rab5cP35278 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rab5cP35278 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab5cP35278 AV356131-201ENSMUST00000206201 750 ntBASIC12.57□□□□□ -0.4
Rab5cP35278 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rab5cP35278 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab5cP35278 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Rab5cP35278 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rab5cP35278 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rab5cP35278 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
Rab5cP35278 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.57□□□□□ -0.4
Rab5cP35278 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab5cP35278 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.57□□□□□ -0.4
Rab5cP35278 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.57□□□□□ -0.4
Rab5cP35278 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab5cP35278 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Rab5cP35278 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab5cP35278 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rab5cP35278 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.56□□□□□ -0.4
Rab5cP35278 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab5cP35278 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Rab5cP35278 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rab5cP35278 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Rab5cP35278 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab5cP35278 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab5cP35278 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab5cP35278 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Rab5cP35278 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab5cP35278 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Rab5cP35278 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab5cP35278 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC12.56□□□□□ -0.4
Rab5cP35278 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rab5cP35278 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Rab5cP35278 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab5cP35278 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab5cP35278 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Rab5cP35278 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Rab5cP35278 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab5cP35278 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab5cP35278 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Rab5cP35278 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab5cP35278 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab5cP35278 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab5cP35278 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Rab5cP35278 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rab5cP35278 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab5cP35278 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab5cP35278 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab5cP35278 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rab5cP35278 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.56□□□□□ -0.4
Rab5cP35278 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Rab5cP35278 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Rab5cP35278 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rab5cP35278 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Rab5cP35278 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rab5cP35278 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rab5cP35278 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Rab5cP35278 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rab5cP35278 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rab5cP35278 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms