Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Slc6a11P31650 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Slc6a11P31650 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Slc6a11P31650 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Slc6a11P31650 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.6□□□□□ -0.07
Slc6a11P31650 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Slc6a11P31650 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Slc6a11P31650 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Slc6a11P31650 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Slc6a11P31650 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Slc6a11P31650 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Slc6a11P31650 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Slc6a11P31650 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Slc6a11P31650 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Slc6a11P31650 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Slc6a11P31650 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Slc6a11P31650 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Slc6a11P31650 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Slc6a11P31650 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Slc6a11P31650 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Slc6a11P31650 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Slc6a11P31650 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Slc6a11P31650 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Slc6a11P31650 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.59□□□□□ -0.07
Slc6a11P31650 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Slc6a11P31650 Gm15372-201ENSMUST00000120729 834 ntBASIC14.59□□□□□ -0.07
Slc6a11P31650 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.59□□□□□ -0.07
Slc6a11P31650 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Slc6a11P31650 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.59□□□□□ -0.07
Slc6a11P31650 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.59□□□□□ -0.07
Slc6a11P31650 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.59□□□□□ -0.07
Slc6a11P31650 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Slc6a11P31650 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Slc6a11P31650 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Slc6a11P31650 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Slc6a11P31650 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Slc6a11P31650 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.59□□□□□ -0.07
Slc6a11P31650 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Slc6a11P31650 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Slc6a11P31650 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Slc6a11P31650 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Slc6a11P31650 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Slc6a11P31650 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Slc6a11P31650 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Slc6a11P31650 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Slc6a11P31650 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Slc6a11P31650 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Slc6a11P31650 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Slc6a11P31650 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Slc6a11P31650 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.58□□□□□ -0.07
Slc6a11P31650 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Slc6a11P31650 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a11P31650 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a11P31650 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a11P31650 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Slc6a11P31650 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a11P31650 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a11P31650 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a11P31650 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a11P31650 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a11P31650 Gm12644-201ENSMUST00000119935 606 ntBASIC14.58□□□□□ -0.08
Slc6a11P31650 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.58□□□□□ -0.08
Slc6a11P31650 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a11P31650 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a11P31650 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a11P31650 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Slc6a11P31650 Gm2213-201ENSMUST00000197485 688 ntBASIC14.58□□□□□ -0.08
Slc6a11P31650 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.58□□□□□ -0.08
Slc6a11P31650 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a11P31650 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Slc6a11P31650 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a11P31650 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.58□□□□□ -0.08
Slc6a11P31650 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a11P31650 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Slc6a11P31650 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
Slc6a11P31650 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a11P31650 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Slc6a11P31650 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a11P31650 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.57□□□□□ -0.08
Slc6a11P31650 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a11P31650 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a11P31650 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a11P31650 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a11P31650 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Slc6a11P31650 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a11P31650 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a11P31650 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a11P31650 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a11P31650 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a11P31650 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a11P31650 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.57□□□□□ -0.08
Slc6a11P31650 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.57□□□□□ -0.08
Slc6a11P31650 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a11P31650 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.57□□□□□ -0.08
Slc6a11P31650 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.57□□□□□ -0.08
Slc6a11P31650 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.57□□□□□ -0.08
Slc6a11P31650 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a11P31650 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Slc6a11P31650 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Slc6a11P31650 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms