Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp3P28862 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Mmp3P28862 Rprl2-201ENSMUST00000157150 290 ntBASIC16.42■□□□□ 0.22
Mmp3P28862 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.42■□□□□ 0.22
Mmp3P28862 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.42■□□□□ 0.22
Mmp3P28862 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.42■□□□□ 0.22
Mmp3P28862 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.42■□□□□ 0.22
Mmp3P28862 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp3P28862 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Mmp3P28862 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp3P28862 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp3P28862 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp3P28862 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp3P28862 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp3P28862 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Mmp3P28862 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.42■□□□□ 0.22
Mmp3P28862 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Mmp3P28862 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp3P28862 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp3P28862 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Mmp3P28862 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Mmp3P28862 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Mmp3P28862 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp3P28862 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp3P28862 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Mmp3P28862 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp3P28862 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp3P28862 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.41■□□□□ 0.22
Mmp3P28862 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp3P28862 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp3P28862 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.41■□□□□ 0.22
Mmp3P28862 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Mmp3P28862 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.41■□□□□ 0.22
Mmp3P28862 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.41■□□□□ 0.22
Mmp3P28862 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.41■□□□□ 0.22
Mmp3P28862 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Mmp3P28862 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Mmp3P28862 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp3P28862 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp3P28862 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp3P28862 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp3P28862 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp3P28862 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp3P28862 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp3P28862 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Mmp3P28862 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp3P28862 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp3P28862 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Mmp3P28862 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.41■□□□□ 0.22
Mmp3P28862 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Mmp3P28862 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp3P28862 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp3P28862 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp3P28862 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp3P28862 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp3P28862 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.4■□□□□ 0.22
Mmp3P28862 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp3P28862 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp3P28862 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp3P28862 Mir6990-201ENSMUST00000183724 91 ntBASIC16.4■□□□□ 0.22
Mmp3P28862 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.4■□□□□ 0.22
Mmp3P28862 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.4■□□□□ 0.22
Mmp3P28862 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp3P28862 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp3P28862 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Mmp3P28862 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Mmp3P28862 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Mmp3P28862 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp3P28862 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp3P28862 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.4■□□□□ 0.22
Mmp3P28862 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp3P28862 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp3P28862 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp3P28862 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp3P28862 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp3P28862 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.39■□□□□ 0.21
Mmp3P28862 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp3P28862 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp3P28862 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.39■□□□□ 0.21
Mmp3P28862 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.39■□□□□ 0.21
Mmp3P28862 Gm18889-201ENSMUST00000174284 929 ntBASIC16.39■□□□□ 0.21
Mmp3P28862 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Mmp3P28862 Gm5312-201ENSMUST00000203728 547 ntBASIC16.39■□□□□ 0.21
Mmp3P28862 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp3P28862 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Mmp3P28862 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp3P28862 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Mmp3P28862 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp3P28862 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp3P28862 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp3P28862 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp3P28862 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Mmp3P28862 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp3P28862 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.38■□□□□ 0.21
Mmp3P28862 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp3P28862 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.38■□□□□ 0.21
Mmp3P28862 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.38■□□□□ 0.21
Mmp3P28862 Gm15920-201ENSMUST00000118998 402 ntBASIC16.38■□□□□ 0.21
Mmp3P28862 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp3P28862 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms