Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.16■□□□□ 0.18
Cd44P15379 Gm14722-201ENSMUST00000118943 689 ntBASIC16.16■□□□□ 0.18
Cd44P15379 AA414768-201ENSMUST00000121924 1257 ntBASIC16.16■□□□□ 0.18
Cd44P15379 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cd44P15379 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.16■□□□□ 0.18
Cd44P15379 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.16■□□□□ 0.18
Cd44P15379 Gm9172-201ENSMUST00000212092 954 ntBASIC16.16■□□□□ 0.18
Cd44P15379 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.16■□□□□ 0.18
Cd44P15379 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.16■□□□□ 0.18
Cd44P15379 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Cd44P15379 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cd44P15379 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cd44P15379 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cd44P15379 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cd44P15379 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cd44P15379 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cd44P15379 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cd44P15379 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Cd44P15379 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
Cd44P15379 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Cd44P15379 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd44P15379 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd44P15379 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd44P15379 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.15■□□□□ 0.18
Cd44P15379 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cd44P15379 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cd44P15379 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cd44P15379 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cd44P15379 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cd44P15379 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cd44P15379 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd44P15379 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cd44P15379 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cd44P15379 Gm25745-201ENSMUST00000174945 133 ntBASIC16.15■□□□□ 0.18
Cd44P15379 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.15■□□□□ 0.18
Cd44P15379 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.15■□□□□ 0.18
Cd44P15379 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cd44P15379 Gm18622-201ENSMUST00000219361 595 ntBASIC16.15■□□□□ 0.18
Cd44P15379 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd44P15379 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Cd44P15379 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cd44P15379 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd44P15379 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cd44P15379 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd44P15379 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd44P15379 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Cd44P15379 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cd44P15379 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd44P15379 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Cd44P15379 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cd44P15379 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Cd44P15379 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cd44P15379 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cd44P15379 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cd44P15379 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cd44P15379 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cd44P15379 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cd44P15379 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cd44P15379 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cd44P15379 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cd44P15379 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cd44P15379 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cd44P15379 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Cd44P15379 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Cd44P15379 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cd44P15379 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.14■□□□□ 0.17
Cd44P15379 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.14■□□□□ 0.17
Cd44P15379 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cd44P15379 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.14■□□□□ 0.17
Cd44P15379 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Cd44P15379 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cd44P15379 Rprl3-201ENSMUST00000157400 290 ntBASIC16.14■□□□□ 0.17
Cd44P15379 Gm27867-201ENSMUST00000184778 125 ntBASIC16.14■□□□□ 0.17
Cd44P15379 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cd44P15379 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cd44P15379 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cd44P15379 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cd44P15379 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cd44P15379 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cd44P15379 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cd44P15379 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cd44P15379 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cd44P15379 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cd44P15379 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cd44P15379 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cd44P15379 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cd44P15379 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cd44P15379 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cd44P15379 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cd44P15379 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cd44P15379 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cd44P15379 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cd44P15379 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cd44P15379 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cd44P15379 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cd44P15379 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cd44P15379 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.13■□□□□ 0.17
Cd44P15379 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
Cd44P15379 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cd44P15379 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms