Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fv4P11370 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fv4P11370 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fv4P11370 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Fv4P11370 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Fv4P11370 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fv4P11370 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fv4P11370 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fv4P11370 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fv4P11370 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fv4P11370 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fv4P11370 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Fv4P11370 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.88□□□□□ -0.03
Fv4P11370 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fv4P11370 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Fv4P11370 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fv4P11370 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fv4P11370 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.88□□□□□ -0.03
Fv4P11370 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Fv4P11370 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.88□□□□□ -0.03
Fv4P11370 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Fv4P11370 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Fv4P11370 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fv4P11370 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Fv4P11370 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fv4P11370 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fv4P11370 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fv4P11370 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Fv4P11370 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fv4P11370 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fv4P11370 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fv4P11370 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fv4P11370 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fv4P11370 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Fv4P11370 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fv4P11370 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Fv4P11370 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fv4P11370 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fv4P11370 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fv4P11370 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Fv4P11370 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Fv4P11370 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fv4P11370 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fv4P11370 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Fv4P11370 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Fv4P11370 Gm8655-201ENSMUST00000221159 852 ntBASIC14.87□□□□□ -0.03
Fv4P11370 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fv4P11370 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fv4P11370 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Fv4P11370 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Fv4P11370 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fv4P11370 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fv4P11370 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fv4P11370 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Fv4P11370 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Fv4P11370 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Fv4P11370 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fv4P11370 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Fv4P11370 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fv4P11370 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Fv4P11370 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fv4P11370 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Fv4P11370 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fv4P11370 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fv4P11370 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Fv4P11370 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fv4P11370 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fv4P11370 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fv4P11370 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Fv4P11370 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fv4P11370 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fv4P11370 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.86□□□□□ -0.03
Fv4P11370 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fv4P11370 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.86□□□□□ -0.03
Fv4P11370 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Fv4P11370 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fv4P11370 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fv4P11370 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fv4P11370 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fv4P11370 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.86□□□□□ -0.03
Fv4P11370 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fv4P11370 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fv4P11370 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fv4P11370 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fv4P11370 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Fv4P11370 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fv4P11370 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Fv4P11370 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fv4P11370 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fv4P11370 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fv4P11370 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fv4P11370 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fv4P11370 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Fv4P11370 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fv4P11370 Grk6-207ENSMUST00000225925 2769 ntBASIC14.85□□□□□ -0.03
Fv4P11370 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Fv4P11370 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fv4P11370 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fv4P11370 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Fv4P11370 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms