Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
UbbP0CG49 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
UbbP0CG49 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.4□□□□□ -0.26
UbbP0CG49 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UbbP0CG49 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
UbbP0CG49 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UbbP0CG49 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
UbbP0CG49 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.4□□□□□ -0.26
UbbP0CG49 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UbbP0CG49 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UbbP0CG49 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
UbbP0CG49 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.4□□□□□ -0.26
UbbP0CG49 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UbbP0CG49 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
UbbP0CG49 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UbbP0CG49 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UbbP0CG49 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UbbP0CG49 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UbbP0CG49 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UbbP0CG49 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
UbbP0CG49 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
UbbP0CG49 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
UbbP0CG49 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.4□□□□□ -0.27
UbbP0CG49 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
UbbP0CG49 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
UbbP0CG49 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UbbP0CG49 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
UbbP0CG49 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UbbP0CG49 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
UbbP0CG49 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.39□□□□□ -0.27
UbbP0CG49 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
UbbP0CG49 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UbbP0CG49 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.39□□□□□ -0.27
UbbP0CG49 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.39□□□□□ -0.27
UbbP0CG49 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
UbbP0CG49 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UbbP0CG49 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UbbP0CG49 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UbbP0CG49 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UbbP0CG49 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UbbP0CG49 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
UbbP0CG49 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
UbbP0CG49 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UbbP0CG49 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
UbbP0CG49 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
UbbP0CG49 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
UbbP0CG49 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
UbbP0CG49 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UbbP0CG49 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UbbP0CG49 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UbbP0CG49 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
UbbP0CG49 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UbbP0CG49 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
UbbP0CG49 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
UbbP0CG49 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UbbP0CG49 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.38□□□□□ -0.27
UbbP0CG49 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UbbP0CG49 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
UbbP0CG49 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
UbbP0CG49 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
UbbP0CG49 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UbbP0CG49 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UbbP0CG49 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
UbbP0CG49 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UbbP0CG49 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
UbbP0CG49 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UbbP0CG49 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
UbbP0CG49 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.38□□□□□ -0.27
UbbP0CG49 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
UbbP0CG49 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
UbbP0CG49 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
UbbP0CG49 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UbbP0CG49 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UbbP0CG49 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
UbbP0CG49 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
UbbP0CG49 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
UbbP0CG49 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.38□□□□□ -0.27
UbbP0CG49 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
UbbP0CG49 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
UbbP0CG49 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
UbbP0CG49 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
UbbP0CG49 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
UbbP0CG49 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
UbbP0CG49 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
UbbP0CG49 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
UbbP0CG49 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UbbP0CG49 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
UbbP0CG49 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UbbP0CG49 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UbbP0CG49 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.37□□□□□ -0.27
UbbP0CG49 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
UbbP0CG49 Mir770-201ENSMUST00000103252 94 ntBASIC13.37□□□□□ -0.27
UbbP0CG49 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UbbP0CG49 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
UbbP0CG49 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UbbP0CG49 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.37□□□□□ -0.27
UbbP0CG49 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UbbP0CG49 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
UbbP0CG49 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UbbP0CG49 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms