Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sod1P08228 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.39□□□□□ -0.11
Sod1P08228 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.39□□□□□ -0.11
Sod1P08228 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.39□□□□□ -0.11
Sod1P08228 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sod1P08228 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Sod1P08228 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sod1P08228 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.39□□□□□ -0.11
Sod1P08228 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sod1P08228 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sod1P08228 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Sod1P08228 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sod1P08228 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sod1P08228 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sod1P08228 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Sod1P08228 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Sod1P08228 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Sod1P08228 Gm13015-201ENSMUST00000118674 204 ntBASIC14.38□□□□□ -0.11
Sod1P08228 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sod1P08228 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sod1P08228 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sod1P08228 Gm27306-201ENSMUST00000183970 107 ntBASIC14.38□□□□□ -0.11
Sod1P08228 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sod1P08228 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sod1P08228 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sod1P08228 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sod1P08228 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sod1P08228 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sod1P08228 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sod1P08228 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sod1P08228 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Sod1P08228 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sod1P08228 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sod1P08228 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sod1P08228 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Sod1P08228 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.38□□□□□ -0.11
Sod1P08228 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sod1P08228 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sod1P08228 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sod1P08228 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sod1P08228 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sod1P08228 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sod1P08228 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.37□□□□□ -0.11
Sod1P08228 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sod1P08228 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sod1P08228 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sod1P08228 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Sod1P08228 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sod1P08228 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sod1P08228 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sod1P08228 Gm12428-201ENSMUST00000119844 727 ntBASIC14.37□□□□□ -0.11
Sod1P08228 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.37□□□□□ -0.11
Sod1P08228 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.37□□□□□ -0.11
Sod1P08228 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.37□□□□□ -0.11
Sod1P08228 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sod1P08228 Gm27920-201ENSMUST00000183953 96 ntBASIC14.37□□□□□ -0.11
Sod1P08228 Gm38294-201ENSMUST00000192831 381 ntBASIC14.37□□□□□ -0.11
Sod1P08228 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.37□□□□□ -0.11
Sod1P08228 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sod1P08228 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.37□□□□□ -0.11
Sod1P08228 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.37□□□□□ -0.11
Sod1P08228 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sod1P08228 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.37□□□□□ -0.11
Sod1P08228 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.37□□□□□ -0.11
Sod1P08228 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sod1P08228 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sod1P08228 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sod1P08228 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sod1P08228 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sod1P08228 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sod1P08228 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sod1P08228 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sod1P08228 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sod1P08228 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sod1P08228 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.37□□□□□ -0.11
Sod1P08228 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sod1P08228 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sod1P08228 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sod1P08228 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sod1P08228 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sod1P08228 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.36□□□□□ -0.11
Sod1P08228 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sod1P08228 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sod1P08228 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sod1P08228 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sod1P08228 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sod1P08228 Gm12151-201ENSMUST00000121374 290 ntBASIC14.36□□□□□ -0.11
Sod1P08228 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.36□□□□□ -0.11
Sod1P08228 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sod1P08228 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.36□□□□□ -0.11
Sod1P08228 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Sod1P08228 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.36□□□□□ -0.11
Sod1P08228 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sod1P08228 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sod1P08228 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sod1P08228 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.36□□□□□ -0.11
Sod1P08228 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sod1P08228 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sod1P08228 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.36□□□□□ -0.11
Sod1P08228 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms